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Crystal Structure of FtsZ with Z1456069604
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-703 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.56 51.92
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.133 α = 90 b = 88.133 β = 90 c = 177.024 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-703 ftsz-703 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-703 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-703 2.03 42.762 100 0.271 0.282 0.077 0.994 8.4 13.3 50153
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-703 2.03 2.065 100 2.188 2.281 0.639 0.342 12.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.03 42.798 50146 2526 99.974 0.182 0.1806 0.1878 0.2172 0.2195 29.697
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.008 -0.004 -0.008 0.027
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 18.4 r_dihedral_angle_3_deg 15.257 r_dihedral_angle_6_deg 14.137 r_lrange_it 8.031 r_lrange_other 7.936 r_dihedral_angle_1_deg 6.822 r_scangle_it 6.471 r_scangle_other 6.47 r_scbond_it 4.137 r_scbond_other 4.136
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 18.4 r_dihedral_angle_3_deg 15.257 r_dihedral_angle_6_deg 14.137 r_lrange_it 8.031 r_lrange_other 7.936 r_dihedral_angle_1_deg 6.822 r_scangle_it 6.471 r_scangle_other 6.47 r_scbond_it 4.137 r_scbond_other 4.136 r_mcangle_other 3.739 r_mcangle_it 3.738 r_mcbond_it 2.523 r_mcbond_other 2.513 r_angle_refined_deg 1.677 r_angle_other_deg 0.646 r_symmetry_nbd_other 0.579 r_xyhbond_nbd_other 0.551 r_symmetry_xyhbond_nbd_refined 0.462 r_symmetry_nbd_refined 0.305 r_nbd_refined 0.217 r_nbd_other 0.209 r_xyhbond_nbd_refined 0.201 r_nbtor_refined 0.17 r_symmetry_xyhbond_nbd_other 0.165 r_symmetry_nbtor_other 0.135 r_chiral_restr 0.076 r_chiral_restr_other 0.021 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.006 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 311 Heterogen Atoms 35
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction