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Crystal Structure of FtsZ with Z1400796579
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-643 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.62 53.09
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.572 α = 90 b = 88.572 β = 90 c = 179.64 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-643 ftsz-643 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-643 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-643 1.929 42.999 100 0.174 0.18 0.049 0.998 11.2 13.3 59847
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-643 1.929 1.962 100 2.065 2.147 0.585 0.39 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.929 43.036 59843 3031 99.963 0.18 0.1787 0.1862 0.2119 0.2172 33.382
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.008 -0.004 -0.008 0.026
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.356 r_dihedral_angle_6_deg 14.248 r_lrange_it 8.824 r_lrange_other 8.803 r_dihedral_angle_2_deg 8.637 r_scangle_it 7.486 r_scangle_other 7.485 r_dihedral_angle_1_deg 6.597 r_scbond_it 4.94 r_scbond_other 4.939
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.356 r_dihedral_angle_6_deg 14.248 r_lrange_it 8.824 r_lrange_other 8.803 r_dihedral_angle_2_deg 8.637 r_scangle_it 7.486 r_scangle_other 7.485 r_dihedral_angle_1_deg 6.597 r_scbond_it 4.94 r_scbond_other 4.939 r_mcangle_other 4.221 r_mcangle_it 4.22 r_mcbond_it 2.949 r_mcbond_other 2.944 r_angle_refined_deg 1.785 r_angle_other_deg 0.653 r_symmetry_nbd_other 0.462 r_symmetry_xyhbond_nbd_refined 0.274 r_nbd_other 0.258 r_symmetry_nbd_refined 0.236 r_nbd_refined 0.218 r_xyhbond_nbd_refined 0.188 r_symmetry_xyhbond_nbd_other 0.173 r_nbtor_refined 0.168 r_symmetry_nbtor_other 0.117 r_chiral_restr 0.084 r_chiral_restr_other 0.061 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 311 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction