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Crystal Structure of FtsZ with Z1416571195
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-520 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.73
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.479 α = 90 b = 88.479 β = 90 c = 178.64 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-520 ftsz-520 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-520 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-520 1.878 44.239 100 0.222 0.23 0.062 0.997 8.5 13.4 64366
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-520 1.878 1.91 100 3.21 3.334 0.894 0.377 13.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.878 44.279 64342 3269 99.955 0.18 0.178 0.1862 0.2091 0.2159 32.356
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.001 -0.001 -0.001 0.005
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.342 r_dihedral_angle_6_deg 14.336 r_dihedral_angle_2_deg 8.779 r_lrange_it 8.639 r_lrange_other 8.611 r_scangle_it 7.673 r_scangle_other 7.671 r_dihedral_angle_1_deg 6.319 r_scbond_it 4.997 r_scbond_other 4.996
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.342 r_dihedral_angle_6_deg 14.336 r_dihedral_angle_2_deg 8.779 r_lrange_it 8.639 r_lrange_other 8.611 r_scangle_it 7.673 r_scangle_other 7.671 r_dihedral_angle_1_deg 6.319 r_scbond_it 4.997 r_scbond_other 4.996 r_mcangle_it 4.172 r_mcangle_other 4.172 r_mcbond_it 2.935 r_mcbond_other 2.933 r_angle_refined_deg 1.74 r_angle_other_deg 0.588 r_symmetry_nbd_other 0.335 r_symmetry_xyhbond_nbd_refined 0.224 r_nbd_refined 0.217 r_nbd_other 0.171 r_nbtor_refined 0.168 r_xyhbond_nbd_refined 0.165 r_symmetry_nbd_refined 0.147 r_symmetry_nbtor_other 0.123 r_chiral_restr 0.082 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.003 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 310 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction