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Crystal Structure of FtsZ with Z33546965
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-516 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.61 52.84
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.426 α = 90 b = 88.426 β = 90 c = 179.273 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-516 ftsz-516 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-516 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-516 2.1 42.927 100 0.265 0.275 0.075 0.996 7.9 13.4 46114
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-516 2.1 2.137 100 2.403 2.508 0.715 0.33 12.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.1 42.964 46109 2345 99.965 0.183 0.1813 0.1883 0.2218 0.2264 36.26
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.005 0.002 0.005 -0.015
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.672 r_dihedral_angle_6_deg 14.142 r_dihedral_angle_2_deg 10.505 r_lrange_it 8.767 r_lrange_other 8.719 r_scangle_it 7.021 r_scangle_other 7.02 r_dihedral_angle_1_deg 6.951 r_scbond_it 4.546 r_scbond_other 4.546
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.672 r_dihedral_angle_6_deg 14.142 r_dihedral_angle_2_deg 10.505 r_lrange_it 8.767 r_lrange_other 8.719 r_scangle_it 7.021 r_scangle_other 7.02 r_dihedral_angle_1_deg 6.951 r_scbond_it 4.546 r_scbond_other 4.546 r_mcangle_other 4.507 r_mcangle_it 4.506 r_mcbond_it 2.997 r_mcbond_other 2.993 r_angle_refined_deg 1.628 r_angle_other_deg 0.583 r_symmetry_nbd_other 0.466 r_nbd_refined 0.219 r_symmetry_xyhbond_nbd_refined 0.203 r_symmetry_nbd_refined 0.193 r_nbd_other 0.183 r_xyhbond_nbd_refined 0.179 r_nbtor_refined 0.17 r_symmetry_nbtor_other 0.112 r_chiral_restr 0.072 r_symmetry_xyhbond_nbd_other 0.058 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction