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Crystal Structure of FtsZ with Z438067480
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-512 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.71
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.557 α = 90 b = 88.557 β = 90 c = 178.25 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-512 ftsz-512 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-512 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-512 1.857 44.278 100 0.241 0.25 0.068 0.997 8.1 13.4 66484
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-512 1.857 1.889 100 3.075 3.194 0.859 0.334 13.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.857 44.318 66475 3379 99.953 0.185 0.1835 0.1906 0.2114 0.2183 29.673
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.003 -0.002 -0.003 0.011
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.62 r_dihedral_angle_3_deg 14.446 r_lrange_it 8.163 r_lrange_other 8.102 r_dihedral_angle_2_deg 7.082 r_scangle_it 6.975 r_scangle_other 6.974 r_dihedral_angle_1_deg 6.404 r_scbond_it 4.474 r_scbond_other 4.474
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.62 r_dihedral_angle_3_deg 14.446 r_lrange_it 8.163 r_lrange_other 8.102 r_dihedral_angle_2_deg 7.082 r_scangle_it 6.975 r_scangle_other 6.974 r_dihedral_angle_1_deg 6.404 r_scbond_it 4.474 r_scbond_other 4.474 r_mcangle_it 3.903 r_mcangle_other 3.902 r_mcbond_it 2.701 r_mcbond_other 2.698 r_angle_refined_deg 1.741 r_angle_other_deg 0.632 r_symmetry_nbd_other 0.488 r_symmetry_xyhbond_nbd_refined 0.287 r_nbd_refined 0.221 r_nbd_other 0.208 r_symmetry_nbd_refined 0.178 r_nbtor_refined 0.169 r_xyhbond_nbd_refined 0.167 r_symmetry_nbtor_other 0.125 r_symmetry_xyhbond_nbd_other 0.102 r_chiral_restr 0.079 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4247 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction