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Crystal Structure of FtsZ with F9994-0329
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-47 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.71
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.523 α = 90 b = 88.523 β = 90 c = 178.418 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-47 ftsz-47 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-03-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-47 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920194 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-47 2.002 44.262 100 0.179 0.186 0.051 0.998 11 13.3 53091
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-47 2.002 2.037 100 1.981 2.061 0.568 0.362 13.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.002 44.301 53085 2679 99.964 0.182 0.18 0.1874 0.2168 0.2221 36.035
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.001 -0.001 0.002
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.114 r_dihedral_angle_6_deg 13.308 r_lrange_it 9.037 r_lrange_other 9.009 r_dihedral_angle_2_deg 8.873 r_scangle_it 7.719 r_scangle_other 7.717 r_dihedral_angle_1_deg 6.57 r_scbond_it 5.039 r_scbond_other 5.038
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.114 r_dihedral_angle_6_deg 13.308 r_lrange_it 9.037 r_lrange_other 9.009 r_dihedral_angle_2_deg 8.873 r_scangle_it 7.719 r_scangle_other 7.717 r_dihedral_angle_1_deg 6.57 r_scbond_it 5.039 r_scbond_other 5.038 r_mcangle_it 4.636 r_mcangle_other 4.636 r_mcbond_it 3.131 r_mcbond_other 3.126 r_angle_refined_deg 1.683 r_angle_other_deg 0.624 r_symmetry_nbd_other 0.463 r_symmetry_xyhbond_nbd_refined 0.29 r_nbd_refined 0.218 r_nbd_other 0.202 r_xyhbond_nbd_refined 0.19 r_symmetry_xyhbond_nbd_other 0.176 r_symmetry_nbd_refined 0.172 r_nbtor_refined 0.167 r_symmetry_nbtor_other 0.111 r_xyhbond_nbd_other 0.099 r_chiral_restr 0.081 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 18
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction