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Crystal Structure of FtsZ with Z1220645147
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-450 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.75
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.399 α = 90 b = 88.399 β = 90 c = 179.06 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-450 ftsz-450 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-450 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-450 2.063 44.2 100 0.269 0.279 0.076 0.996 8.2 13.4 48611
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-450 2.063 2.098 100 3.234 3.369 0.941 0.324 12.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.063 44.239 48580 2455 99.93 0.178 0.176 0.1842 0.2149 0.2203 35.848
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.008 -0.004 -0.008 0.026
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.752 r_dihedral_angle_6_deg 14.125 r_lrange_it 9.132 r_lrange_other 9.088 r_scangle_it 7.746 r_scangle_other 7.744 r_dihedral_angle_2_deg 7.136 r_dihedral_angle_1_deg 6.405 r_scbond_it 5.008 r_scbond_other 5.006
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.752 r_dihedral_angle_6_deg 14.125 r_lrange_it 9.132 r_lrange_other 9.088 r_scangle_it 7.746 r_scangle_other 7.744 r_dihedral_angle_2_deg 7.136 r_dihedral_angle_1_deg 6.405 r_scbond_it 5.008 r_scbond_other 5.006 r_mcangle_it 4.31 r_mcangle_other 4.31 r_mcbond_it 2.939 r_mcbond_other 2.936 r_angle_refined_deg 1.659 r_angle_other_deg 0.588 r_symmetry_nbd_other 0.409 r_symmetry_xyhbond_nbd_refined 0.228 r_xyhbond_nbd_refined 0.221 r_nbd_refined 0.218 r_symmetry_nbd_refined 0.218 r_nbd_other 0.194 r_nbtor_refined 0.168 r_symmetry_xyhbond_nbd_other 0.104 r_symmetry_nbtor_other 0.103 r_chiral_restr 0.076 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.003 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 35
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction