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Crystal Structure of FtsZ with Z94597856
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-410 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.64 53.47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.781 α = 90 b = 88.781 β = 90 c = 180.249 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-410 ftsz-410 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-410 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-410 2.093 43.103 100 0.185 0.194 0.061 0.997 9.7 10.1 47239
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-410 2.093 2.129 100 2.223 2.355 0.775 0.358 9.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.093 43.14 47228 2401 99.943 0.181 0.1791 0.1862 0.2155 0.221 38.984
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.007 -0.003 -0.007 0.023
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.95 r_dihedral_angle_6_deg 14.209 r_lrange_it 9.331 r_lrange_other 9.324 r_scangle_it 7.377 r_scangle_other 7.376 r_dihedral_angle_2_deg 6.982 r_dihedral_angle_1_deg 6.619 r_scbond_it 4.8 r_scbond_other 4.8
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.95 r_dihedral_angle_6_deg 14.209 r_lrange_it 9.331 r_lrange_other 9.324 r_scangle_it 7.377 r_scangle_other 7.376 r_dihedral_angle_2_deg 6.982 r_dihedral_angle_1_deg 6.619 r_scbond_it 4.8 r_scbond_other 4.8 r_mcangle_other 4.583 r_mcangle_it 4.582 r_mcbond_it 3.113 r_mcbond_other 3.11 r_angle_refined_deg 1.741 r_angle_other_deg 0.652 r_symmetry_nbd_other 0.493 r_symmetry_xyhbond_nbd_refined 0.263 r_symmetry_nbd_refined 0.255 r_nbd_other 0.24 r_nbd_refined 0.222 r_symmetry_xyhbond_nbd_other 0.214 r_xyhbond_nbd_refined 0.189 r_nbtor_refined 0.171 r_symmetry_nbtor_other 0.126 r_chiral_restr 0.077 r_xyhbond_nbd_other 0.066 r_bond_refined_d 0.008 r_gen_planes_refined 0.006 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 306 Heterogen Atoms 18
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction