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Mycobacterial NDH-2 (type II NADH:quinone oxidoreductase) with tricyclic spirolactam inhibitor
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 8.778 f_angle_d 0.569 f_chiral_restr 0.044 f_plane_restr 0.004 f_bond_d 0.003
Sample Mycobacterial NDH-2 ((type II NADH:quinone oxidoreductase) with tricyclic spirolactam inhibitor
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument LEICA EM GP Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 62351 Reported Resolution (Å) 3 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C2
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type TFS FALCON 4i (4k x 4k) Electron Dose (electrons/Å**2) 50
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 1200 Maximum Defocus (nm) 2000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 165000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC v5.0.0-beta MODEL REFINEMENT PHENIX 1.19.2_4158 CTF CORRECTION cryoSPARC v5.0.0-beta INITIAL EULER ASSIGNMENT cryoSPARC v5.0.0-beta FINAL EULER ASSIGNMENT cryoSPARC v5.0.0-beta RECONSTRUCTION cryoSPARC v5.0.0-beta
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION