MA_MAT3VR3776

Predicted interaction between HDAC1 (1-392) and CREBBP (2347-2442)

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Homo sapiens (Human) CREBBP (Q92793; 2347 - 2442)	transcription factor binding protein binding binding bHLH transcription factor binding DNA-binding transcription factor binding MRF binding acetyltransferase activity acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity cytoskeletal protein binding tau protein binding protein-lysine-acetyltransferase activity transcription factor binding protein binding binding bHLH transcription factor binding DNA-binding transcription factor binding MRF binding acetyltransferase activity acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity cytoskeletal protein binding tau protein binding protein-lysine-acetyltransferase activity catalytic activity, acting on a protein protein N-acetyltransferase activity N-acetyltransferase activity histone H3 acetyltransferase activity histone H3K27 acetyltransferase activity protein N-acyltransferase activity histone acetyltransferase activity histone modifying activity N-acyltransferase activity p53 binding RNA polymerase II-specific DNA-binding transcription factor binding chromatin binding transcription coactivator activity transcription regulator activity transcription coregulator activity DNA binding damaged DNA binding nucleic acid binding histone H3K18 acetyltransferase activity transcription corepressor activity peptide lactyltransferase (CoA-dependent) activity transcription coregulator binding transcription coactivator binding chromatin DNA binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	protein destabilization regulation of protein stability biological regulation regulation of biological quality cellular response to stimulus cellular response to nutrient levels response to nutrient levels response to stimulus cellular process regulation of DNA recombination regulation of cellular process regulation of double-strand break repair regulation of cellular response to stress positive regulation of biological process protein destabilization regulation of protein stability biological regulation regulation of biological quality cellular response to stimulus cellular response to nutrient levels response to nutrient levels response to stimulus cellular process regulation of DNA recombination regulation of cellular process regulation of double-strand break repair regulation of cellular response to stress positive regulation of biological process positive regulation of double-strand break repair via homologous recombination regulation of primary metabolic process nucleobase-containing compound metabolic process positive regulation of response to stimulus positive regulation of metabolic process positive regulation of DNA repair cellular response to stress response to stress regulation of response to stress recombinational repair positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process double-strand break repair via homologous recombination positive regulation of cellular process DNA repair positive regulation of DNA recombination double-strand break repair regulation of biological process DNA recombination primary metabolic process DNA metabolic process regulation of macromolecule metabolic process nucleic acid metabolic process positive regulation of double-strand break repair regulation of DNA repair regulation of double-strand break repair via homologous recombination positive regulation of DNA metabolic process DNA damage response regulation of response to stimulus metabolic process macromolecule metabolic process regulation of metabolic process regulation of DNA metabolic process RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription response to decreased oxygen levels response to hypoxia response to oxygen levels response to abiotic stimulus negative regulation of biological process negative regulation of RNA biosynthetic process transcription by RNA polymerase II negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process negative regulation of macromolecule metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of RNA metabolic process positive regulation of DNA-templated transcription positive regulation of macromolecule biosynthetic process positive regulation of biosynthetic process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process cellular response to heat regulation of cellular response to heat response to heat response to temperature stimulus cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular component organization or biogenesis regulation of localization regulation of protein localization positive regulation of protein localization to nucleus regulation of protein localization to nucleus protein localization to nucleus localization macromolecule localization protein localization to organelle positive regulation of protein localization intracellular protein localization signaling canonical NF-kappaB signal transduction intracellular signal transduction cell communication intracellular signaling cassette signal transduction positive regulation of cell communication cell surface receptor protein serine/threonine kinase signaling pathway positive regulation of signal transduction cellular response to growth factor stimulus cellular response to transforming growth factor beta stimulus regulation of transmembrane receptor protein serine/threonine kinase signaling pathway regulation of signal transduction regulation of transforming growth factor beta receptor signaling pathway cellular response to endogenous stimulus enzyme-linked receptor protein signaling pathway regulation of signaling cell surface receptor signaling pathway regulation of cellular response to transforming growth factor beta stimulus response to endogenous stimulus positive regulation of transforming growth factor beta receptor signaling pathway regulation of cellular response to growth factor stimulus positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway positive regulation of cellular response to transforming growth factor beta stimulus response to transforming growth factor beta transforming growth factor beta receptor signaling pathway regulation of cell communication response to growth factor transforming growth factor beta receptor superfamily signaling pathway positive regulation of signaling smoothened signaling pathway regulation of smoothened signaling pathway peptidyl-lysine acetylation N-terminal peptidyl-lysine acetylation peptidyl-lysine modification protein acylation protein maturation protein acetylation N-terminal protein amino acid modification macromolecule modification peptidyl-amino acid modification N-terminal protein amino acid acetylation protein metabolic process protein modification process positive regulation of response to biotic stimulus immune response-regulating cell surface receptor signaling pathway response to biotic stimulus immune response-activating signaling pathway positive regulation of immune response regulation of immune system process positive regulation of immune system process innate immune response-activating signaling pathway immune response response to other organism immune response-activating cell surface receptor signaling pathway regulation of innate immune response response to external stimulus response to lectin defense response to other organism cellular response to lectin positive regulation of defense response activation of innate immune response regulation of immune response activation of immune response regulation of defense response regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms regulation of response to external stimulus innate immune response activating cell surface receptor signaling pathway positive regulation of response to external stimulus immune response-regulating signaling pathway innate immune response response to external biotic stimulus positive regulation of innate immune response defense response defense response to symbiont stimulatory C-type lectin receptor signaling pathway immune system process rhythmic process response to light stimulus cellular response to radiation response to UV cellular response to environmental stimulus cellular response to light stimulus response to radiation cellular response to abiotic stimulus cellular response to UV cAMP/PKA signal transduction homeostatic process negative regulation of transcription by RNA polymerase I transcription by RNA polymerase I regulation of transcription by RNA polymerase I developmental process multicellular organismal process limb development appendage development embryonic limb morphogenesis embryonic morphogenesis embryonic appendage morphogenesis embryo development multicellular organism development anatomical structure morphogenesis appendage morphogenesis anatomical structure development embryonic digit morphogenesis limb morphogenesis	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex transcription regulator complex intracellular organelle organelle membraneless organelle intracellular membraneless organelle chromatin chromosome catalytic complex transferase complex cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex transcription regulator complex intracellular organelle organelle membraneless organelle intracellular membraneless organelle chromatin chromosome catalytic complex transferase complex histone acetyltransferase complex acetyltransferase complex protein acetyltransferase complex intracellular protein-containing complex membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen nuclear body
A	Homo sapiens (Human) HDAC1 (Q13547; 1 - 392)	Krueppel-associated box domain binding protein binding binding protein domain specific binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding NF-kappaB binding histone deacetylase binding enzyme binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding Krueppel-associated box domain binding protein binding binding protein domain specific binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding NF-kappaB binding histone deacetylase binding enzyme binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding double-stranded DNA binding core promoter sequence-specific DNA binding nucleic acid binding transcription regulatory region nucleic acid binding deacetylase activity protein lysine deacetylase activity catalytic activity, acting on a protein deacylase activity catalytic activity protein lysine delactylase activity chromatin binding promoter-specific chromatin binding RNA polymerase II core promoter sequence-specific DNA binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cation binding ion binding metal ion binding small molecule binding histone deacetylase activity histone modifying activity p53 binding transcription coregulator binding transcription corepressor binding cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding transcription corepressor activity transcription regulator activity transcription coregulator activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides hydrolase activity protein decrotonylase activity histone decrotonylase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds E-box binding histone deacetylase activity, hydrolytic mechanism	developmental process regulation of biological process regulation of cellular process regulation of developmental process cellular developmental process biological regulation regulation of cell differentiation stem cell differentiation cell differentiation regulation of stem cell differentiation cellular process regulation of biosynthetic process positive regulation of biological process regulation of macromolecule metabolic process developmental process regulation of biological process regulation of cellular process regulation of developmental process cellular developmental process biological regulation regulation of cell differentiation stem cell differentiation cell differentiation regulation of stem cell differentiation cellular process regulation of biosynthetic process positive regulation of biological process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of macromolecule biosynthetic process metabolic process positive regulation of macromolecule metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of cellular process cellular response to stimulus response to stimulus signaling negative regulation of signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway negative regulation of biological process regulation of signal transduction negative regulation of cell communication cell communication negative regulation of Wnt signaling pathway negative regulation of cellular process signal transduction Wnt signaling pathway regulation of signaling cell surface receptor signaling pathway regulation of Wnt signaling pathway negative regulation of response to stimulus negative regulation of signal transduction negative regulation of canonical Wnt signaling pathway regulation of response to stimulus regulation of cell communication rhythmic process circadian regulation of gene expression circadian rhythm negative regulation of transforming growth factor beta receptor signaling pathway cell surface receptor protein serine/threonine kinase signaling pathway cellular response to growth factor stimulus cellular response to transforming growth factor beta stimulus regulation of transmembrane receptor protein serine/threonine kinase signaling pathway regulation of transforming growth factor beta receptor signaling pathway cellular response to endogenous stimulus enzyme-linked receptor protein signaling pathway regulation of cellular response to transforming growth factor beta stimulus response to endogenous stimulus regulation of cellular response to growth factor stimulus response to transforming growth factor beta transforming growth factor beta receptor signaling pathway response to growth factor transforming growth factor beta receptor superfamily signaling pathway negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway negative regulation of locomotion regulation of cell motility regulation of locomotion regulation of cell migration negative regulation of cell motility cell migration cell motility negative regulation of cell migration locomotion cell population proliferation regulation of smooth muscle cell proliferation positive regulation of cell population proliferation smooth muscle cell proliferation positive regulation of smooth muscle cell proliferation regulation of cell population proliferation muscle cell proliferation epithelium development epidermal cell differentiation epidermis development anatomical structure development tissue development epithelial cell differentiation biological process involved in interspecies interaction between organisms host-mediated suppression of viral proces host-mediated perturbation of viral transcription host-mediated suppression of viral transcription host-mediated perturbation of viral process modulation of process of another organism host-mediated perturbation of symbiont process multicellular organismal process negative regulation of developmental process regulation of stem cell population maintenance stem cell population maintenance negative regulation of stem cell population maintenance regulation of multicellular organismal process maintenance of cell number negative regulation of multicellular organismal process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of DNA-templated transcription negative regulation of RNA metabolic process positive regulation of DNA-templated transcription positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process cellular component organization chromatin organization cellular component organization or biogenesis ectodermal placode morphogenesis molting cycle process hair cycle animal organ development hair follicle placode formation ectodermal placode formation anatomical structure morphogenesis skin development skin epidermis development hair follicle development molting cycle anatomical structure formation involved in morphogenesis ectodermal placode development hair cycle process head development forebrain development brain development nervous system development pallium development multicellular organism development central nervous system development telencephalon development hippocampus development limbic system development system development neurogenesis gliogenesis oligodendrocyte differentiation glial cell differentiation cellular response to platelet-derived growth factor stimulus response to platelet-derived growth factor regulation of cell fate commitment cell fate specification regulation of cell fate specification cell fate commitment odontogenesis of dentin-containing tooth odontogenesis animal organ morphogenesis negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death negative regulation of intracellular signal transduction negative regulation of canonical NF-kappaB signal transduction intracellular signal transduction regulation of intracellular signal transduction intracellular signaling cassette canonical NF-kappaB signal transduction regulation of canonical NF-kappaB signal transduction positive regulation of developmental process positive regulation of stem cell population maintenance positive regulation of multicellular organismal process endoderm development generation of neurons neuron differentiation regulation of intrinsic apoptotic signaling pathway negative regulation of apoptotic signaling pathway intrinsic apoptotic signaling pathway negative regulation of intrinsic apoptotic signaling pathway apoptotic signaling pathway regulation of apoptotic signaling pathway chromatin remodeling epigenetic regulation of gene expression negative regulation of gene expression negative regulation of gene expression, epigenetic cellular component biogenesis cellular component assembly heterochromatin formation heterochromatin organization constitutive heterochromatin formation DNA methylation-dependent constitutive heterochromatin formation positive regulation of nervous system development cell development regulation of neurogenesis regulation of gliogenesis positive regulation of gliogenesis regulation of cell development regulation of nervous system development positive regulation of cell differentiation positive regulation of neurogenesis positive regulation of oligodendrocyte differentiation regulation of multicellular organismal development positive regulation of cell development regulation of glial cell differentiation positive regulation of glial cell differentiation regulation of oligodendrocyte differentiation eyelid development in camera-type eye sensory organ development eye development visual system development camera-type eye development sensory system development intracellular receptor signaling pathway response to lipid hormone-mediated signaling pathway negative regulation of intracellular steroid hormone receptor signaling pathway response to hormone response to steroid hormone regulation of intracellular steroid hormone receptor signaling pathway androgen receptor signaling pathway nuclear receptor-mediated steroid hormone signaling pathway cellular response to steroid hormone stimulus steroid hormone receptor signaling pathway cellular response to hormone stimulus regulation of androgen receptor signaling pathway cellular response to chemical stimulus response to chemical cellular response to lipid negative regulation of androgen receptor signaling pathway nuclear receptor-mediated signaling pathway positive regulation of cell communication positive regulation of signal transduction positive regulation of intracellular estrogen receptor signaling pathway positive regulation of response to stimulus regulation of intracellular estrogen receptor signaling pathway positive regulation of intracellular signal transduction estrogen receptor signaling pathway positive regulation of intracellular steroid hormone receptor signaling pathway positive regulation of signaling tongue development fungiform papilla formation fungiform papilla development sensory organ morphogenesis fungiform papilla morphogenesis tongue morphogenesis limb development appendage development embryonic limb morphogenesis embryonic morphogenesis embryonic appendage morphogenesis embryo development appendage morphogenesis embryonic digit morphogenesis limb morphogenesis	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol intracellular organelle organelle membraneless organelle intracellular membraneless organelle chromatin chromosome membrane-bounded organelle protein-containing complex ATPase complex nucleus cellular anatomical structure intracellular anatomical structure cytoplasm cytosol intracellular organelle organelle membraneless organelle intracellular membraneless organelle chromatin chromosome membrane-bounded organelle protein-containing complex ATPase complex nucleus membrane-enclosed lumen nuclear protein-containing complex transcription regulator complex intracellular organelle lumen histone deacetylase complex nucleoplasm NuRD complex SWI/SNF superfamily-type complex catalytic complex intracellular membrane-bounded organelle organelle lumen CHD-type complex nuclear lumen heterochromatin somatodendritic compartment cell body neuronal cell body Sin3-type complex nuclear chromosome transcription repressor complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR043145	Zinc finger, ZZ-type superfamily	Homologous Superfamily
B	IPR018359	Bromodomain, conserved site	Conserved Site
B	IPR036529	Coactivator CBP, KIX domain superfamily	Homologous Superfamily
B	IPR009110	Nuclear receptor coactivator, interlocking	Homologous Superfamily
B	IPR056484	Histone acetyltransferase p300/CREBBP, PHD domain	Domain
B	IPR000197	Zinc finger, TAZ-type	Domain
B	IPR000433	Zinc finger, ZZ-type	Domain
B	IPR003101	Coactivator CBP, KIX domain	Domain
B	IPR013178	Histone acetyltransferase Rtt109/CBP	Family
B	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
B	IPR036427	Bromodomain-like superfamily	Homologous Superfamily
B	IPR010303	CREB-binding protein/p300, atypical RING domain	Domain
B	IPR001487	Bromodomain	Domain
B	IPR035898	TAZ domain superfamily	Homologous Superfamily
B	IPR037073	Nuclear receptor coactivator, CREB-bp-like, interlocking domain superfamily	Homologous Superfamily
B	IPR014744	Nuclear receptor coactivator, CREB-bp-like, interlocking	Domain
B	IPR038547	CBP/p300, atypical RING domain superfamily	Homologous Superfamily
B	IPR031162	CBP/p300-type histone acetyltransferase domain	Domain
A	IPR023801	Histone deacetylase domain	Domain
A	IPR000286	Histone deacetylase HDAC	Family
A	IPR003084	Class I/II Histone deacetylase HDAC	Family
A	IPR037138	Histone deacetylase domain superfamily	Homologous Superfamily
A	IPR023696	Ureohydrolase domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	: Q92793	Rubinstein-Taybi syndrome transitional cell carcinoma esophageal squamous cell carcinoma urinary bladder cancer follicular lymphoma adenoid cystic carcinoma Rubinstein-Taybi syndrome due to CREBBP mutations Sezary syndrome small cell lung carcinoma prostate cancer salivary gland adenoid cystic carcinoma squamous cell carcinoma Rubinstein-Taybi syndrome due to 16p13.3 microdeletion amyotrophic lateral sclerosis type 1 Lymphoma, Large-Cell, Follicular Rubinstein-Taybi syndrome transitional cell carcinoma esophageal squamous cell carcinoma urinary bladder cancer follicular lymphoma adenoid cystic carcinoma Rubinstein-Taybi syndrome due to CREBBP mutations Sezary syndrome small cell lung carcinoma prostate cancer salivary gland adenoid cystic carcinoma squamous cell carcinoma Rubinstein-Taybi syndrome due to 16p13.3 microdeletion amyotrophic lateral sclerosis type 1 Lymphoma, Large-Cell, Follicular non-Hodgkin lymphoma ovarian cancer acute myeloid leukemia cancer endogenous depression intellectual disability osteogenesis imperfecta plasma cell myeloma acute myeloid leukemia with t(8;16)(p11;p13) translocation astrocytic tumor small cell carcinoma cleft lip lung adenocarcinoma osteosarcoma schizophrenia bipolar disorder diffuse large B-cell lymphoma subependymal giant cell astrocytoma urinary bladder neoplasm
A	: Q13547	squamous cell carcinoma plasma cell myeloma endometriosis heart disease Familial Primary Pulmonary Hypertension osteosarcoma pancreatic intraductal papillary-mucinous neoplasm schizophrenia acute T cell leukemia atypical teratoid rhabdoid tumor glioblastoma idiopathic pulmonary arterial hypertension malignant ependymoma medulloblastoma ovarian cancer squamous cell carcinoma plasma cell myeloma endometriosis heart disease Familial Primary Pulmonary Hypertension osteosarcoma pancreatic intraductal papillary-mucinous neoplasm schizophrenia acute T cell leukemia atypical teratoid rhabdoid tumor glioblastoma idiopathic pulmonary arterial hypertension malignant ependymoma medulloblastoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia primary cutaneous T-cell lymphoma adult T-cell leukemia/lymphoma breast cancer lung cancer malignant glioma pancreatic intraductal papillary-mucinous carcinoma pilocytic astrocytoma primitive neuroectodermal tumor subependymal giant cell astrocytoma astrocytic tumor cancer hematologic disease lymphoplasmacytic lymphoma mature T-cell and NK-cell non-Hodgkin lymphoma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.