MA_MAT3VR3590

Predicted interaction between ATRX (168-301) and MRE11 (1-405)

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Homo sapiens (Human) MRE11 (P49959; 1 - 405)	nuclease activity catalytic activity, acting on a nucleic acid catalytic activity cation binding manganese ion binding transition metal ion binding ion binding binding metal ion binding small molecule binding hydrolase activity, acting on ester bonds 3'-5' exonuclease activity hydrolase activity exonuclease activity nuclease activity catalytic activity, acting on a nucleic acid catalytic activity cation binding manganese ion binding transition metal ion binding ion binding binding metal ion binding small molecule binding hydrolase activity, acting on ester bonds 3'-5' exonuclease activity hydrolase activity exonuclease activity DNA endonuclease activity endonuclease activity catalytic activity, acting on DNA single-stranded DNA endodeoxyribonuclease activity DNA nuclease activity cell adhesion molecule binding cadherin binding protein binding identical protein binding DNA exonuclease activity DNA exonuclease activity, producing 5'-phosphomonoesters 3'-5'-DNA exonuclease activity DNA binding double-stranded DNA binding nucleic acid binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process double-strand break repair DNA double-strand break processing primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process metabolic process macromolecule metabolic process cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process double-strand break repair DNA double-strand break processing primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process metabolic process macromolecule metabolic process DNA repair homologous recombination sexual reproduction reproductive process meiotic cell cycle process cellular component organization meiosis I meiotic nuclear division cell cycle cellular component organization or biogenesis reciprocal homologous recombination cell cycle process DNA recombination meiotic cell cycle organelle fission reciprocal meiotic recombination nuclear division organelle organization meiosis I cell cycle process cell population proliferation chromosome organization sister chromatid cohesion mitochondrial double-strand break repair mitochondrial double-strand break repair via homologous recombination recombinational repair positive regulation of organelle organization regulation of telomere maintenance regulation of cellular component organization regulation of cellular process positive regulation of cellular component organization positive regulation of biological process telomere organization regulation of primary metabolic process positive regulation of metabolic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process positive regulation of telomere maintenance regulation of biological process biological regulation regulation of chromosome organization regulation of macromolecule metabolic process regulation of organelle organization positive regulation of chromosome organization telomere maintenance positive regulation of DNA metabolic process regulation of metabolic process regulation of DNA metabolic process DNA damage checkpoint signaling regulation of cell cycle phase transition signaling negative regulation of biological process negative regulation of cell cycle cell cycle phase transition intracellular signal transduction mitotic cell cycle negative regulation of mitotic cell cycle cell communication regulation of mitotic cell cycle mitotic DNA integrity checkpoint signaling mitotic DNA damage checkpoint signaling negative regulation of cellular process negative regulation of cell cycle phase transition signal transduction mitotic intra-S DNA damage checkpoint signaling regulation of cell cycle regulation of cell cycle process DNA integrity checkpoint signaling negative regulation of cell cycle process cell cycle checkpoint signaling mitotic cell cycle checkpoint signaling mitotic cell cycle process signal transduction in response to DNA damage G2/M transition of mitotic cell cycle mitotic G2/M transition checkpoint cell cycle G2/M phase transition negative regulation of mitotic cell cycle phase transition regulation of G2/M transition of mitotic cell cycle regulation of cell cycle G2/M phase transition regulation of mitotic cell cycle phase transition negative regulation of cell cycle G2/M phase transition negative regulation of G2/M transition of mitotic cell cycle mitotic cell cycle phase transition regulation of double-strand break repair regulation of cellular response to stress positive regulation of response to stimulus positive regulation of DNA repair regulation of response to stress positive regulation of double-strand break repair regulation of DNA repair regulation of response to stimulus telomere maintenance via telomerase nucleobase-containing compound biosynthetic process macromolecule biosynthetic process RNA-templated DNA biosynthetic process telomere maintenance via telomere lengthening nucleic acid biosynthetic process biosynthetic process DNA biosynthetic process chromatin organization chromatin remodeling R-loop processing negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death negative regulation of double-strand break repair via nonhomologous end joining negative regulation of DNA repair negative regulation of double-strand break repair negative regulation of nucleobase-containing compound metabolic process regulation of double-strand break repair via nonhomologous end joining negative regulation of macromolecule metabolic process double-strand break repair via nonhomologous end joining negative regulation of response to stimulus negative regulation of metabolic process negative regulation of DNA metabolic process meiotic chromosome segregation chromosome organization involved in meiotic cell cycle homologous chromosome pairing at meiosis nuclear chromosome segregation homologous chromosome segregation chromosome segregation telomeric 3' overhang formation DNA strand elongation telomere capping meiotic DNA double-strand break formation regulation of DNA recombination mitotic recombination regulation of mitotic recombination DNA-templated DNA replication DNA-templated DNA replication maintenance of fidelity DNA replication DNA strand resection involved in replication fork processing replication fork processing mitotic G2 DNA damage checkpoint signaling double-strand break repair via homologous recombination	membrane-bounded organelle intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure BRCA1-C complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle cytoplasm cytosol membraneless organelle intracellular membraneless organelle membrane-bounded organelle intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure BRCA1-C complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle cytoplasm cytosol membraneless organelle intracellular membraneless organelle chromosome chromosome, telomeric region chromosomal region membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen replication fork Mre11 complex site of double-strand break site of DNA damage nuclear body PML body
A	Homo sapiens (Human) ATRX (P46100; 168 - 301)	histone H3K9me2/3 reader activity histone reader activity histone H3 reader activity chromatin-protein adaptor activity protein-macromolecule adaptor activity molecular adaptor activity protein binding binding histone binding chromo shadow domain binding protein domain specific binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding histone H3K9me2/3 reader activity histone reader activity histone H3 reader activity chromatin-protein adaptor activity protein-macromolecule adaptor activity molecular adaptor activity protein binding binding histone binding chromo shadow domain binding protein domain specific binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on a nucleic acid helicase activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity chromatin binding DNA binding nucleic acid binding chromatin DNA binding ATP-dependent activity, acting on DNA catalytic activity, acting on DNA DNA translocase activity pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides cation binding transition metal ion binding zinc ion binding metal ion binding	developmental process multicellular organismal process limb development appendage development post-embryonic appendage morphogenesis forelimb morphogenesis multicellular organism development anatomical structure morphogenesis post-embryonic limb morphogenesis appendage morphogenesis anatomical structure development post-embryonic animal morphogenesis post-embryonic forelimb morphogenesis post-embryonic development developmental process multicellular organismal process limb development appendage development post-embryonic appendage morphogenesis forelimb morphogenesis multicellular organism development anatomical structure morphogenesis post-embryonic limb morphogenesis appendage morphogenesis anatomical structure development post-embryonic animal morphogenesis post-embryonic forelimb morphogenesis post-embryonic development limb morphogenesis spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process developmental process involved in reproduction male gamete generation gamete generation DNA-templated DNA replication DNA-templated DNA replication maintenance of fidelity primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process DNA replication metabolic process cellular process macromolecule metabolic process replication fork processing regulation of maintenance of mitotic sister chromatid cohesion mitotic sister chromatid cohesion, telomeric negative regulation of maintenance of sister chromatid cohesion regulation of cellular component organization regulation of cellular process negative regulation of maintenance of mitotic sister chromatid cohesion mitotic sister chromatid cohesion regulation of maintenance of mitotic sister chromatid cohesion, telomeric negative regulation of biological process negative regulation of cell cycle maintenance of sister chromatid cohesion maintenance of mitotic sister chromatid cohesion, telomeric cellular component organization negative regulation of sister chromatid cohesion negative regulation of chromosome organization maintenance of mitotic sister chromatid cohesion negative regulation of cellular process cellular component organization or biogenesis cell cycle regulation of cell cycle cell cycle process regulation of biological process negative regulation of cellular component organization regulation of cell cycle process biological regulation chromosome organization sister chromatid cohesion regulation of chromosome organization negative regulation of cell cycle process regulation of organelle organization negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric regulation of maintenance of sister chromatid cohesion organelle organization negative regulation of organelle organization regulation of sister chromatid cohesion RNA metabolic process regulation of primary metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process microtubule cytoskeleton organization meiotic cell cycle meiotic spindle organization meiotic cell cycle process microtubule-based process cytoskeleton organization spindle organization subtelomeric heterochromatin formation cellular component biogenesis cellular component assembly chromatin organization chromatin remodeling negative regulation of macromolecule metabolic process heterochromatin formation epigenetic regulation of gene expression negative regulation of metabolic process heterochromatin organization negative regulation of gene expression constitutive heterochromatin formation negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of gene expression, epigenetic cellular response to stimulus response to stimulus cellular response to stress DNA damage response response to stress DNA repair localization protein localization to chromosome protein localization to organelle macromolecule localization protein localization to chromosome, telomeric region intracellular protein localization positive regulation of organelle organization regulation of telomere maintenance positive regulation of cellular component organization positive regulation of biological process telomere organization positive regulation of metabolic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of telomere maintenance positive regulation of chromosome organization telomere maintenance positive regulation of DNA metabolic process regulation of DNA metabolic process cellular developmental process sex differentiation cell development epithelial cell differentiation Sertoli cell differentiation male gonad development male sex differentiation development of primary male sexual characteristics development of primary sexual characteristics cell differentiation reproductive structure development system development epithelium development gonad development reproductive system development Sertoli cell development animal organ development tissue development epithelial cell development multicellular organism growth developmental growth growth positive regulation of DNA-templated transcription positive regulation of macromolecule biosynthetic process transcription by RNA polymerase II positive regulation of biosynthetic process regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process tube development seminiferous tubule development chromosome organization involved in meiotic cell cycle protein-containing complex organization protein-DNA complex assembly protein-DNA complex organization protein-containing complex assembly nucleosome assembly nucleosome organization positive regulation of DNA replication nuclear DNA replication cell cycle DNA replication positive regulation of nuclear cell cycle DNA replication positive regulation of cell cycle process regulation of nuclear cell cycle DNA replication positive regulation of cell cycle regulation of DNA-templated DNA replication positive regulation of DNA-templated DNA replication regulation of DNA replication head development forebrain development brain development nervous system development central nervous system development signaling signal transduction by p53 class mediator DNA damage response, signal transduction by p53 class mediator intracellular signal transduction cell communication signal transduction in response to DNA damage signal transduction cellular response to nitrogen compound cellular response to hydroxyurea cellular response to chemical stimulus response to hydroxyurea response to chemical response to nitrogen compound	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen chromatin heterochromatin chromosome, telomeric region chromosomal region nucleoplasm chromosome, subtelomeric region pericentric heterochromatin chromosome, centromeric region condensed chromosome, centromeric region condensed chromosome nuclear body PML body

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR029052	Metallo-dependent phosphatase-like	Homologous Superfamily
B	IPR038487	Mre11, capping domain	Homologous Superfamily
B	IPR003701	DNA double-strand break repair protein Mre11	Family
B	IPR004843	Calcineurin-like, phosphoesterase domain	Domain
B	IPR007281	Mre11, DNA-binding	Domain
B	IPR041796	DNA double-strand break repair protein Mre11, N-terminal metallophosphatase domain	Domain
A	IPR049730	SNF2/RAD5-like, C-terminal helicase domain	Domain
A	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A	IPR001650	Helicase, C-terminal domain-like	Domain
A	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
A	IPR014001	Helicase superfamily 1/2, ATP-binding domain	Domain
A	IPR052131	ATRX domain-containing protein	Family
A	IPR041430	ATRX, ADD domain	Domain
A	IPR025766	ADD domain	Domain
A	IPR000330	SNF2, N-terminal	Domain
A	IPR011011	Zinc finger, FYVE/PHD-type	Homologous Superfamily
A	IPR038718	SNF2-like, N-terminal domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	Pharos: P49959	ataxia-telangiectasia-like disorder 1 microcephaly osteosarcoma ataxia-telangiectasia-like disorder ataxia, early-onset, with oculomotor apraxia and hypoalbuminemia BAP1-related tumor predisposition syndrome hereditary breast carcinoma intellectual disability malignant colon neoplasm Malignant neoplasm of ovary Nijmegen breakage syndrome-like disorder cancer hereditary breast ovarian cancer syndrome large cell medulloblastoma malignant ependymoma ataxia-telangiectasia-like disorder 1 microcephaly osteosarcoma ataxia-telangiectasia-like disorder ataxia, early-onset, with oculomotor apraxia and hypoalbuminemia BAP1-related tumor predisposition syndrome hereditary breast carcinoma intellectual disability malignant colon neoplasm Malignant neoplasm of ovary Nijmegen breakage syndrome-like disorder cancer hereditary breast ovarian cancer syndrome large cell medulloblastoma malignant ependymoma medulloblastoma obstructive sleep apnea syndrome atypical teratoid rhabdoid tumor Charcot-Marie-Tooth disease hereditary hemorrhagic telangiectasia lung cancer
A	Pharos: P46100	alpha thalassemia-X-linked intellectual disability syndrome alpha-thalassemia-myelodysplastic syndrome intellectual disability malignant glioma myelodysplastic syndrome neuroblastoma glioblastoma mixed glioma neuroendocrine neoplasm Craniofacial Abnormalities salivary gland adenoid cystic carcinoma thoracic disease X-linked intellectual disability-hypotonic face syndrome adenoid cystic carcinoma autism, susceptibility to, X-linked 2 alpha thalassemia-X-linked intellectual disability syndrome alpha-thalassemia-myelodysplastic syndrome intellectual disability malignant glioma myelodysplastic syndrome neuroblastoma glioblastoma mixed glioma neuroendocrine neoplasm Craniofacial Abnormalities salivary gland adenoid cystic carcinoma thoracic disease X-linked intellectual disability-hypotonic face syndrome adenoid cystic carcinoma autism, susceptibility to, X-linked 2 cryptorchidism penile disease psoriasis Smith-Fineman-Myers syndrome ulcerative colitis lung adenocarcinoma malignant ependymoma malignant pancreatic neoplasm astrocytic tumor congenital anemia pancreatic endocrine carcinoma Pick disease rheumatoid arthritis glioma spinal cord disease hereditary spastic paraplegia Juberg-Marsidi syndrome lung cancer acute myeloid leukemia medulloblastoma atypical teratoid rhabdoid tumor brain disease osteogenesis imperfecta diabetes mellitus pancreatic neoplasm genetic endocrine growth disease large cell medulloblastoma lymphoplasmacytic lymphoma arthrogryposis microcephaly cancer ovarian cancer

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.