MA_MAT3VR3554

Predicted interaction between MLH1 (1-343) and MSH6 (362-1360)

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Homo sapiens (Human) MSH6 (P52701; 362 - 1360)	DNA binding guanine/thymine mispair binding double-stranded DNA binding binding mismatched DNA binding nucleic acid binding chromatin binding ATP-dependent activity, acting on DNA catalytic activity, acting on DNA catalytic activity, acting on a nucleic acid catalytic activity ATP-dependent activity damaged DNA binding DNA damage sensor activity DNA binding guanine/thymine mispair binding double-stranded DNA binding binding mismatched DNA binding nucleic acid binding chromatin binding ATP-dependent activity, acting on DNA catalytic activity, acting on DNA catalytic activity, acting on a nucleic acid catalytic activity ATP-dependent activity damaged DNA binding DNA damage sensor activity molecular sensor activity ATP-dependent DNA damage sensor activity molecular function regulator activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein binding enzyme binding histone reader activity histone H3 reader activity chromatin-protein adaptor activity protein-macromolecule adaptor activity histone H3K36me3 reader activity molecular adaptor activity	immune system development multicellular organismal process immunoglobulin production somatic cell DNA recombination nucleobase-containing compound metabolic process multicellular organism development somatic recombination of immunoglobulin gene segments anatomical structure development somatic diversification of immune receptors system development developmental process production of molecular mediator of immune response DNA recombination primary metabolic process immune system development multicellular organismal process immunoglobulin production somatic cell DNA recombination nucleobase-containing compound metabolic process multicellular organism development somatic recombination of immunoglobulin gene segments anatomical structure development somatic diversification of immune receptors system development developmental process production of molecular mediator of immune response DNA recombination primary metabolic process DNA metabolic process gene expression macromolecule biosynthetic process nucleic acid metabolic process somatic diversification of immunoglobulins biosynthetic process immune system process somatic diversification of immune receptors via germline recombination within a single locus metabolic process cellular process macromolecule metabolic process spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process developmental process involved in reproduction male gamete generation gamete generation cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cell death intracellular signal transduction cell communication apoptotic signaling pathway signal transduction apoptotic process intrinsic apoptotic signaling pathway programmed cell death mismatch repair meiotic cell cycle meiotic cell cycle process meiotic mismatch repair meiosis I cell cycle process cellular response to stress DNA damage response response to stress cell cycle cell cycle process DNA repair regulation of DNA recombination negative regulation of biological process regulation of primary metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process negative regulation of macromolecule metabolic process negative regulation of metabolic process regulation of macromolecule metabolic process negative regulation of DNA recombination negative regulation of DNA metabolic process regulation of metabolic process regulation of DNA metabolic process somatic diversification of immune receptors via somatic mutation somatic hypermutation of immunoglobulin genes determination of adult lifespan intrinsic apoptotic signaling pathway in response to DNA damage response to light stimulus response to radiation response to abiotic stimulus response to UV adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains lymphocyte mediated immunity immunoglobulin production involved in immunoglobulin-mediated immune response B cell activation involved in immune response lymphocyte activation cell activation involved in immune response leukocyte activation somatic diversification of immunoglobulins involved in immune response leukocyte activation involved in immune response leukocyte mediated immunity lymphocyte activation involved in immune response somatic recombination of immunoglobulin genes involved in immune response immune response B cell activation cell activation immunoglobulin mediated immune response adaptive immune response immune effector process B cell mediated immunity isotype switching	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure organelle MutSalpha complex mismatch repair complex cytoplasm cytosol membrane-enclosed lumen membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure organelle MutSalpha complex mismatch repair complex cytoplasm cytosol membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen membraneless organelle intracellular membraneless organelle chromatin chromosome Golgi apparatus endomembrane system
A	Homo sapiens (Human) MLH1 (P40692; 1 - 343)	DNA binding guanine/thymine mispair binding double-stranded DNA binding binding mismatched DNA binding nucleic acid binding chromatin binding ATP-dependent activity, acting on DNA DNA damage sensor activity molecular sensor activity catalytic activity, acting on DNA ATP-dependent DNA damage sensor activity catalytic activity, acting on a nucleic acid molecular function regulator activity DNA binding guanine/thymine mispair binding double-stranded DNA binding binding mismatched DNA binding nucleic acid binding chromatin binding ATP-dependent activity, acting on DNA DNA damage sensor activity molecular sensor activity catalytic activity, acting on DNA ATP-dependent DNA damage sensor activity catalytic activity, acting on a nucleic acid molecular function regulator activity catalytic activity ATP-dependent activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding enzyme regulator activity enzyme activator activity molecular function activator activity pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides protein binding enzyme binding	adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains response to stimulus regulation of leukocyte activation regulation of cell activation B cell activation involved in immune response positive regulation of macromolecule biosynthetic process regulation of primary metabolic process multicellular organism development positive regulation of immune response regulation of immune system process positive regulation of macromolecule metabolic process system development positive regulation of DNA recombination positive regulation of immunoglobulin mediated immune response adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains response to stimulus regulation of leukocyte activation regulation of cell activation B cell activation involved in immune response positive regulation of macromolecule biosynthetic process regulation of primary metabolic process multicellular organism development positive regulation of immune response regulation of immune system process positive regulation of macromolecule metabolic process system development positive regulation of DNA recombination positive regulation of immunoglobulin mediated immune response immune response DNA recombination primary metabolic process DNA metabolic process immune effector process regulation of gene expression biosynthetic process positive regulation of DNA metabolic process regulation of response to stimulus B cell mediated immunity positive regulation of production of molecular mediator of immune response regulation of macromolecule biosynthetic process metabolic process regulation of DNA metabolic process immunoglobulin production regulation of developmental process positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains somatic cell DNA recombination somatic diversification of immunoglobulins involved in immune response positive regulation of lymphocyte activation somatic recombination of immunoglobulin gene segments positive regulation of biosynthetic process regulation of immunoglobulin mediated immune response regulation of B cell activation leukocyte activation involved in immune response positive regulation of isotype switching positive regulation of immune effector process positive regulation of cellular process production of molecular mediator of immune response positive regulation of immunoglobulin production regulation of isotype switching cell activation regulation of macromolecule metabolic process macromolecule biosynthetic process nucleic acid metabolic process positive regulation of gene expression immune system process somatic diversification of immune receptors via germline recombination within a single locus cellular process regulation of lymphocyte activation lymphocyte mediated immunity regulation of immune effector process multicellular organismal process regulation of DNA recombination positive regulation of leukocyte mediated immunity regulation of cellular process cell activation involved in immune response nucleobase-containing compound metabolic process positive regulation of developmental process positive regulation of cell activation positive regulation of metabolic process anatomical structure development positive regulation of leukocyte activation leukocyte mediated immunity somatic diversification of immune receptors regulation of nucleobase-containing compound metabolic process positive regulation of adaptive immune response positive regulation of immune system process somatic recombination of immunoglobulin genes involved in immune response developmental process regulation of biological process regulation of adaptive immune response regulation of B cell mediated immunity somatic diversification of immunoglobulins regulation of leukocyte mediated immunity regulation of immune response positive regulation of multicellular organismal process regulation of production of molecular mediator of immune response macromolecule metabolic process regulation of metabolic process isotype switching immune system development immunoglobulin production involved in immunoglobulin-mediated immune response positive regulation of lymphocyte mediated immunity positive regulation of biological process lymphocyte activation positive regulation of B cell mediated immunity leukocyte activation positive regulation of response to stimulus regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains positive regulation of isotype switching to IgG isotypes regulation of multicellular organismal process lymphocyte activation involved in immune response regulation of biosynthetic process B cell activation biological regulation gene expression adaptive immune response immunoglobulin mediated immune response positive regulation of B cell activation regulation of isotype switching to IgG isotypes regulation of lymphocyte mediated immunity regulation of immunoglobulin production isotype switching to IgG isotypes meiotic chromosome segregation sexual reproduction reproductive process organelle fission meiotic cell cycle multicellular organismal reproductive process female gamete generation meiotic cell cycle process gamete generation cellular component organization nuclear division organelle organization female meiotic nuclear division nuclear chromosome segregation meiotic nuclear division cellular component organization or biogenesis cell cycle female meiosis chromosome segregation chromosome segregation cell cycle process spermatogenesis developmental process involved in reproduction male gamete generation localization telomere localization meiosis I chromosome localization organelle localization meiotic telomere clustering chromosome organization chromosome organization involved in meiotic cell cycle chromosome localization to nuclear envelope involved in homologous chromosome segregation meiosis I cell cycle process homologous chromosome segregation cellular developmental process oogenesis cell development cellular process involved in reproduction in multicellular organism cell differentiation germ cell development metaphase chromosome alignment meiotic metaphase I homologous chromosome alignment meiotic metaphase chromosome alignment cellular response to stimulus mismatch repair cellular response to stress DNA damage response response to stress DNA repair homologous recombination resolution of meiotic recombination intermediates reciprocal homologous recombination reciprocal meiotic recombination negative regulation of biological process post-transcriptional regulation of gene expression regulation of RNA metabolic process regulation of biological quality RNA catabolic process mRNA catabolic process negative regulation of metabolic process positive regulation of mRNA metabolic process nucleobase-containing compound catabolic process nuclear-transcribed mRNA poly(A) tail shortening positive regulation of RNA metabolic process negative regulation of gene expression negative regulation of macromolecule biosynthetic process nucleic acid catabolic process nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay catabolic process RNA metabolic process macromolecule catabolic process mRNA destabilization regulation of mRNA catabolic process negative regulation of cellular process negative regulation of macromolecule metabolic process nuclear-transcribed mRNA catabolic process RNA destabilization regulation of catabolic process mRNA metabolic process positive regulation of catabolic process regulation of mRNA stability negative regulation of biosynthetic process positive regulation of mRNA catabolic process regulation of RNA stability regulation of mRNA metabolic process regulation of mitotic recombination negative regulation of nucleobase-containing compound metabolic process negative regulation of mitotic recombination mitotic recombination negative regulation of DNA recombination negative regulation of DNA metabolic process homologous chromosome pairing at meiosis somatic diversification of immune receptors via somatic mutation somatic hypermutation of immunoglobulin genes signaling cell death intracellular signal transduction cell communication apoptotic signaling pathway intrinsic apoptotic signaling pathway in response to DNA damage signal transduction apoptotic process intrinsic apoptotic signaling pathway programmed cell death biological process involved in interspecies interaction between organisms response to other organism response to bacterium response to external stimulus response to external biotic stimulus response to biotic stimulus male meiotic nuclear division male meiosis chromosome segregation positive regulation of isotype switching to IgA isotypes isotype switching to IgA isotypes regulation of isotype switching to IgA isotypes double-strand break repair double-strand break repair via nonhomologous end joining meiotic spindle midzone assembly spindle midzone assembly microtubule cytoskeleton organization membraneless organelle assembly cellular component biogenesis cellular component assembly spindle organization organelle assembly spindle assembly microtubule-based process cytoskeleton organization	cellular anatomical structure membrane membrane-bounded organelle condensed nuclear chromosome intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle nuclear chromosome chromosome intracellular membrane-bounded organelle chiasma intracellular organelle lumen intracellular organelle cellular anatomical structure membrane membrane-bounded organelle condensed nuclear chromosome intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle nuclear chromosome chromosome intracellular membrane-bounded organelle chiasma intracellular organelle lumen intracellular organelle organelle lumen organelle membraneless organelle condensed chromosome nuclear lumen recombination nodule late recombination nodule nucleoplasm protein-containing complex nuclear protein-containing complex MutLalpha complex mismatch repair complex synaptonemal structure synaptonemal complex male germ cell nucleus germ cell nucleus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR045076	DNA mismatch repair MutS	Family
B	IPR000313	PWWP domain	Domain
B	IPR007861	DNA mismatch repair protein MutS, clamp	Domain
B	IPR017261	DNA mismatch repair protein MutS/MSH	Family
B	IPR016151	DNA mismatch repair protein MutS, N-terminal	Homologous Superfamily
B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B	IPR000432	DNA mismatch repair protein MutS, C-terminal	Domain
B	IPR007696	DNA mismatch repair protein MutS, core	Domain
B	IPR007860	DNA mismatch repair protein MutS, connector domain	Domain
B	IPR007695	DNA mismatch repair protein MutS-like, N-terminal	Domain
B	IPR036187	DNA mismatch repair protein MutS, core domain superfamily	Homologous Superfamily
B	IPR036678	MutS, connector domain superfamily	Homologous Superfamily
A	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	Homologous Superfamily
A	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
A	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
A	IPR038973	DNA mismatch repair protein MutL/Mlh/Pms-like	Family
A	IPR013507	DNA mismatch repair protein, S5 domain 2-like	Domain
A	IPR002099	DNA mismatch repair protein MutL/Mlh/PMS	Family
A	IPR014762	DNA mismatch repair, conserved site	Conserved Site
A	IPR032189	DNA mismatch repair protein Mlh1, C-terminal	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	Pharos: P52701	Lynch syndrome colorectal cancer, hereditary nonpolyposis, type 5 mismatch repair cancer syndrome endometrial cancer mismatch repair cancer syndrome 1 lung adenocarcinoma Muir-Torre syndrome ovarian cancer cancer colorectal cancer Microsatellite Instability endometrial carcinoma glioblastoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia IgA glomerulonephritis Lynch syndrome colorectal cancer, hereditary nonpolyposis, type 5 mismatch repair cancer syndrome endometrial cancer mismatch repair cancer syndrome 1 lung adenocarcinoma Muir-Torre syndrome ovarian cancer cancer colorectal cancer Microsatellite Instability endometrial carcinoma glioblastoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia IgA glomerulonephritis plasma cell myeloma large cell medulloblastoma lung cancer BAP1-related tumor predisposition syndrome Lynch syndrome 1 colon carcinoma Down syndrome nasopharyngeal carcinoma familial prostate carcinoma non-small cell lung carcinoma hematopoietic and lymphoid system neoplasm ovarian carcinoma peripheral nervous system disease invasive ductal breast carcinoma primitive neuroectodermal tumor leukemia subependymal giant cell astrocytoma attention deficit hyperactivity disorder, inattentive type lymphoplasmacytic lymphoma breast-ovarian cancer, familial, susceptibility to, 1 malignant ependymoma colorectal adenocarcinoma dermatomyositis medulloblastoma endometriosis osteosarcoma hereditary breast carcinoma ovarian neoplasm peripheral neuropathy juvenile dermatomyositis psoriasis uterine disease atypical teratoid rhabdoid tumor malignant glioma digestive system disease endometrium carcinoma in situ neurofibromatosis type 1
A	Pharos: P40692	Lynch syndrome Muir-Torre syndrome ovarian cancer colorectal cancer lymphoma mismatch repair cancer syndrome mismatch repair cancer syndrome 1 colorectal cancer, hereditary nonpolyposis, type 2 Neoplasm Metastasis prostate cancer malignant colon neoplasm cancer adenoma colorectal adenocarcinoma colorectal carcinoma Lynch syndrome Muir-Torre syndrome ovarian cancer colorectal cancer lymphoma mismatch repair cancer syndrome mismatch repair cancer syndrome 1 colorectal cancer, hereditary nonpolyposis, type 2 Neoplasm Metastasis prostate cancer malignant colon neoplasm cancer adenoma colorectal adenocarcinoma colorectal carcinoma endometrial cancer endometrium carcinoma in situ uterine disease hematopoietic and lymphoid system neoplasm intellectual disability benign colon neoplasm colon carcinoma ovarian carcinoma endometrial carcinoma gastric adenocarcinoma hereditary breast carcinoma lung adenocarcinoma Lynch syndrome 1 colonic neoplasm neurofibromatosis type 1 digestive system disease ovarian neoplasm endometriosis psoriasis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

MA_MAT3VR3554

Predicted interaction between MLH1 (1-343) and MSH6 (362-1360)

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation