MA_MAT3VR3186

Predicted interaction between REC8 (478-547) and SMC1A (1-1233)

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Homo sapiens (Human) REC8 (O95072; 478 - 547)	chromatin binding binding	cellular component organization organelle organization chromosome organization sister chromatid cohesion cellular process cellular component organization or biogenesis cell cycle meiotic sister chromatid cohesion cell cycle process developmental process multicellular organismal process reproductive system development gonad development tube development cellular component organization organelle organization chromosome organization sister chromatid cohesion cellular process cellular component organization or biogenesis cell cycle meiotic sister chromatid cohesion cell cycle process developmental process multicellular organismal process reproductive system development gonad development tube development reproductive process sex differentiation animal organ development developmental process involved in reproduction male gonad development male sex differentiation multicellular organism development development of primary male sexual characteristics development of primary sexual characteristics seminiferous tubule development anatomical structure development reproductive structure development system development spermatid development spermatid differentiation sexual reproduction cellular developmental process spermatogenesis multicellular organismal reproductive process cell development cellular process involved in reproduction in multicellular organism gamete generation male gamete generation cell differentiation germ cell development cellular response to stimulus double-strand break repair response to stimulus DNA recombination primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress recombinational repair metabolic process macromolecule metabolic process double-strand break repair via homologous recombination DNA repair fertilization homologous recombination meiotic cell cycle process meiosis I meiotic nuclear division reciprocal homologous recombination meiotic cell cycle organelle fission reciprocal meiotic recombination nuclear division meiosis I cell cycle process meiotic chromosome segregation synaptonemal complex assembly cellular component biogenesis cellular component assembly synaptonemal complex organization chromosome segregation chromosome organization involved in meiotic cell cycle homologous chromosome pairing at meiosis nuclear chromosome segregation homologous chromosome segregation male meiosis I male meiotic nuclear division oogenesis developmental maturation female gamete generation oocyte development anatomical structure maturation oocyte maturation oocyte differentiation cell maturation	intracellular anatomical structure intracellular membraneless organelle chromosome chromosomal region kinetochore intracellular organelle cellular anatomical structure organelle membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome membrane-bounded organelle intracellular anatomical structure intracellular membraneless organelle chromosome chromosomal region kinetochore intracellular organelle cellular anatomical structure organelle membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome membrane-bounded organelle condensed nuclear chromosome nucleus membrane-enclosed lumen nuclear chromosome intracellular membrane-bounded organelle intracellular organelle lumen lateral element organelle lumen synaptonemal structure synaptonemal complex nuclear lumen protein-containing complex meiotic cohesin complex cohesin complex male germ cell nucleus germ cell nucleus
B	Homo sapiens (Human) SMC1A (Q14683; 1 - 1233)	chromatin binding binding protein heterodimerization activity protein binding protein dimerization activity RNA binding nucleic acid binding protein-containing complex binding mediator complex binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding chromatin binding binding protein heterodimerization activity protein binding protein dimerization activity RNA binding nucleic acid binding protein-containing complex binding mediator complex binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity	cellular process cell division cellular response to biotic stimulus cellular response to stimulus cellular response to endogenous stimulus response to stimulus response to DNA integrity checkpoint signaling response to DNA damage checkpoint signaling response to endogenous stimulus response to cell cycle checkpoint signaling response to biotic stimulus response to radiation response to abiotic stimulus cellular component organization cellular process cell division cellular response to biotic stimulus cellular response to stimulus cellular response to endogenous stimulus response to stimulus response to DNA integrity checkpoint signaling response to DNA damage checkpoint signaling response to endogenous stimulus response to cell cycle checkpoint signaling response to biotic stimulus response to radiation response to abiotic stimulus cellular component organization organelle organization chromosome organization sister chromatid cohesion cellular component organization or biogenesis cell cycle cell cycle process mitotic nuclear division organelle fission sister chromatid segregation mitotic cell cycle nuclear division mitotic cell cycle process mitotic sister chromatid segregation nuclear chromosome segregation chromosome segregation mitotic sister chromatid cohesion establishment of mitotic sister chromatid cohesion establishment of sister chromatid cohesion primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress metabolic process macromolecule metabolic process DNA repair establishment of meiotic sister chromatid cohesion meiotic sister chromatid cohesion microtubule cytoskeleton organization membraneless organelle assembly cellular component biogenesis cellular component assembly microtubule cytoskeleton organization involved in mitosis spindle organization organelle assembly spindle assembly mitotic spindle organization mitotic spindle assembly microtubule-based process cytoskeleton organization developmental process multicellular organismal process somatic stem cell population maintenance maintenance of cell number stem cell population maintenance sexual reproduction reproductive process meiotic cell cycle	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle nuclear lumen nuclear matrix condensed nuclear chromosome intracellular membraneless organelle membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle nuclear lumen nuclear matrix condensed nuclear chromosome intracellular membraneless organelle nuclear chromosome chromosome membraneless organelle condensed chromosome cytoplasm cytosol chromosome, centromeric region chromosomal region protein-containing complex mitotic cohesin complex cohesin complex nucleoplasm kinetochore condensed chromosome, centromeric region supramolecular complex mitotic spindle spindle cytoskeleton mitotic spindle pole spindle pole microtubule cytoskeleton meiotic cohesin complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR039781	Rad21/Rec8-like protein	Family
A	IPR006910	Rad21/Rec8-like protein, N-terminal	Domain
A	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
A	IPR023093	ScpA-like, C-terminal	Homologous Superfamily
A	IPR006909	Rad21/Rec8-like protein, C-terminal, eukaryotic	Domain
B	IPR028468	Smc1, ATP-binding cassette domain	Domain
B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B	IPR010935	SMCs flexible hinge	Domain
B	IPR036277	SMCs flexible hinge superfamily	Homologous Superfamily
B	IPR003395	RecF/RecN/SMC, N-terminal	Domain
B	IPR024704	Structural maintenance of chromosomes protein	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: O95072	melanoma prostate cancer astrocytic tumor glioblastoma malignant mesothelioma osteosarcoma atypical teratoid rhabdoid tumor large cell medulloblastoma medulloblastoma ovarian cancer Prostatic Neoplasms cutaneous melanoma malignant ependymoma primitive neuroectodermal tumor
B	Pharos: Q14683	Cornelia de Lange syndrome myeloid leukemia Cornelia de Lange syndrome 2 adenoid cystic carcinoma salivary gland adenoid cystic carcinoma epilepsy chronic monocytic leukemia urinary bladder cancer intellectual disability lung adenocarcinoma malignant glioma myopathy neurofibromatosis type 1 osteosarcoma atypical teratoid rhabdoid tumor Cornelia de Lange syndrome myeloid leukemia Cornelia de Lange syndrome 2 adenoid cystic carcinoma salivary gland adenoid cystic carcinoma epilepsy chronic monocytic leukemia urinary bladder cancer intellectual disability lung adenocarcinoma malignant glioma myopathy neurofibromatosis type 1 osteosarcoma atypical teratoid rhabdoid tumor pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia congenital anemia primitive neuroectodermal tumor Cornelia de Lange syndrome 3 Roberts syndrome Down syndrome urinary bladder neoplasm glioblastoma juvenile dermatomyositis lymphoplasmacytic lymphoma medulloblastoma nasopharyngeal carcinoma oligodendroglioma adenoma ovarian cancer breast cancer pilocytic astrocytoma psoriasis Cytopenia Wiedemann-Steiner syndrome large cell medulloblastoma malignant ependymoma osteogenesis imperfecta astrocytic tumor pancreatic intraductal papillary-mucinous carcinoma dermatomyositis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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