AF_AFQ9Y385F1

Computed structure model of Ubiquitin-conjugating enzyme E2 J1

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Ubiquitin-conjugating enzyme E2 J1	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding ubiquitin conjugating enzyme activity aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein conjugating enzyme activity transferase activity catalytic activity ubiquitin-protein transferase activity ubiquitin protein ligase binding protein binding ubiquitin-like protein ligase binding enzyme binding	developmental process spermatid development spermatid differentiation sexual reproduction cellular developmental process spermatogenesis reproductive process multicellular organismal reproductive process cell development cellular process involved in reproduction in multicellular organism developmental process involved in reproduction gamete generation male gamete generation cell differentiation anatomical structure development developmental process spermatid development spermatid differentiation sexual reproduction cellular developmental process spermatogenesis reproductive process multicellular organismal reproductive process cell development cellular process involved in reproduction in multicellular organism developmental process involved in reproduction gamete generation male gamete generation cell differentiation anatomical structure development germ cell development cellular process protein polyubiquitination primary metabolic process protein ubiquitination macromolecule modification metabolic process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal cellular response to stimulus catabolic process response to stimulus proteasomal protein catabolic process protein catabolic process macromolecule catabolic process ERAD pathway cellular response to stress response to chemical response to stress response to endoplasmic reticulum stress multicellular organismal process regulation of immune effector process regulation of cellular process cytokine production regulation of cytokine production regulation of immune system process regulation of multicellular organismal process myeloid leukocyte cytokine production cytokine production involved in immune response production of molecular mediator of immune response regulation of biosynthetic process regulation of biological process regulation of cytokine production involved in immune response immune response biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process immune effector process regulation of gene expression regulation of macrophage cytokine production biosynthetic process immune system process regulation of macromolecule biosynthetic process regulation of production of molecular mediator of immune response regulation of metabolic process macrophage cytokine production regulation of tumor necrosis factor production tumor necrosis factor superfamily cytokine production tumor necrosis factor production regulation of tumor necrosis factor superfamily cytokine production negative regulation of protein transport regulation of localization establishment of protein localization negative regulation of biological process negative regulation of intracellular protein transport negative regulation of transport localization intercellular transport establishment of localization in cell intracellular protein localization negative regulation of protein exit from endoplasmic reticulum regulation of intracellular transport negative regulation of establishment of protein localization intracellular transport establishment of localization regulation of intracellular protein transport intracellular protein transport regulation of protein exit from endoplasmic reticulum protein exit from endoplasmic reticulum cellular localization regulation of protein localization transport regulation of retrograde protein transport, ER to cytosol negative regulation of cellular process negative regulation of protein localization negative regulation of intracellular transport endoplasmic reticulum to cytosol transport regulation of transport regulation of establishment of protein localization regulation of protein transport protein transport regulation of cellular localization macromolecule localization retrograde protein transport, ER to cytosol negative regulation of retrograde protein transport, ER to cytosol	membrane-bounded organelle protein-containing complex cytoplasmic ubiquitin ligase complex intracellular anatomical structure ubiquitin ligase complex membrane protein complex transferase complex endomembrane system ER ubiquitin ligase complex endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum protein-containing complex membrane-bounded organelle protein-containing complex cytoplasmic ubiquitin ligase complex intracellular anatomical structure ubiquitin ligase complex membrane protein complex transferase complex endomembrane system ER ubiquitin ligase complex endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum protein-containing complex endoplasmic reticulum membrane catalytic complex organelle subcompartment membrane intracellular membrane-bounded organelle organelle endoplasmic reticulum cytoplasm Hrd1p ubiquitin ligase complex organelle membrane intracellular protein-containing complex nucleus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR016135	Ubiquitin-conjugating enzyme/RWD-like	Homologous Superfamily
A	IPR000608	Ubiquitin-conjugating (UBC), catalytic core domain	Domain
A	IPR050113	Ubiquitin-conjugating enzyme E2-like	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q9Y385	primitive neuroectodermal tumor Sjogren syndrome atypical teratoid rhabdoid tumor Crohn disease glioblastoma malignant ependymoma medulloblastoma ovarian cancer pilocytic astrocytoma psoriasis tuberculosis breast cancer dermatomyositis interstitial cystitis malignant glioma primitive neuroectodermal tumor Sjogren syndrome atypical teratoid rhabdoid tumor Crohn disease glioblastoma malignant ependymoma medulloblastoma ovarian cancer pilocytic astrocytoma psoriasis tuberculosis breast cancer dermatomyositis interstitial cystitis malignant glioma nephrosclerosis pancreatic ductal adenocarcinoma plasma cell myeloma rheumatoid arthritis ulcerative colitis chronic kidney disease Down syndrome large cell medulloblastoma malignant pancreatic neoplasm osteosarcoma pancreatic intraductal papillary-mucinous neoplasm

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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