AF_AFQ27Q52F1

Computed structure model of Protein Wnt-5a

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Protein Wnt-5a	protein binding binding signaling receptor binding receptor tyrosine kinase-like orphan receptor binding G protein-coupled receptor binding frizzled binding protein domain specific binding molecular function activator activity molecular function regulator activity signaling receptor regulator activity chemoattractant activity involved in axon guidance receptor ligand activity chemoattractant activity signaling receptor activator activity protein binding binding signaling receptor binding receptor tyrosine kinase-like orphan receptor binding G protein-coupled receptor binding frizzled binding protein domain specific binding molecular function activator activity molecular function regulator activity signaling receptor regulator activity chemoattractant activity involved in axon guidance receptor ligand activity chemoattractant activity signaling receptor activator activity cytokine activity	developmental process multicellular organism development multicellular organismal process skeletal system development connective tissue development anatomical structure development animal organ development tissue development cartilage development system development tissue morphogenesis anatomical structure morphogenesis epithelium development convergent extension involved in organogenesis developmental process multicellular organism development multicellular organismal process skeletal system development connective tissue development anatomical structure development animal organ development tissue development cartilage development system development tissue morphogenesis anatomical structure morphogenesis epithelium development convergent extension involved in organogenesis convergent extension morphogenesis of an epithelium urinary bladder development renal system development cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction regulation of programmed cell death positive regulation of apoptotic signaling pathway cell communication positive regulation of response to stimulus signal transduction positive regulation of cellular process regulation of biological process regulation of signaling positive regulation of programmed cell death regulation of apoptotic process biological regulation cell death positive regulation of apoptotic process apoptotic signaling pathway regulation of response to stimulus regulation of cell communication cellular process apoptotic process programmed cell death positive regulation of signaling regulation of apoptotic signaling pathway cell surface receptor signaling pathway canonical Wnt signaling pathway Wnt signaling pathway heart development heart formation heart morphogenesis specification of animal organ identity pattern specification process regionalization circulatory system development anatomical structure formation involved in morphogenesis secondary heart field specification animal organ morphogenesis animal organ formation heart field specification positive regulation of non-canonical Wnt signaling pathway positive regulation of Wnt signaling pathway non-canonical Wnt signaling pathway regulation of Wnt signaling pathway regulation of non-canonical Wnt signaling pathway branching involved in mammary gland duct morphogenesis mammary gland morphogenesis mammary gland development branching morphogenesis of an epithelial tube gland development lateral sprouting from an epithelium tube morphogenesis gland morphogenesis epithelial tube morphogenesis tube development lateral sprouting involved in mammary gland duct morphogenesis mammary gland duct morphogenesis mammary gland epithelium development morphogenesis of a branching structure morphogenesis of a branching epithelium mesenchymal-epithelial cell signaling cell-cell signaling cervix development reproductive system development reproductive process reproductive structure development developmental process involved in reproduction positive regulation of response to biotic stimulus regulation of type I interferon-mediated signaling pathway response to cytokine response to biotic stimulus interferon-mediated signaling pathway cellular response to type I interferon positive regulation of immune response cellular response to cytokine stimulus regulation of immune system process positive regulation of immune system process immune response response to other organism regulation of innate immune response response to external stimulus regulation of response to cytokine stimulus response to chemical defense response to other organism positive regulation of defense response regulation of immune response response to type I interferon regulation of defense response regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms regulation of response to external stimulus positive regulation of type I interferon-mediated signaling pathway positive regulation of response to cytokine stimulus cytokine-mediated signaling pathway positive regulation of response to external stimulus regulation of response to stress response to stress innate immune response response to external biotic stimulus positive regulation of innate immune response defense response regulation of cytokine-mediated signaling pathway defense response to symbiont response to peptide immune system process type I interferon-mediated signaling pathway positive regulation of cytokine-mediated signaling pathway axis elongation developmental growth growth developmental growth involved in morphogenesis convergent extension involved in axis elongation negative regulation of cell population proliferation cell population proliferation negative regulation of biological process regulation of mesenchymal cell proliferation regulation of cell population proliferation mesenchymal cell proliferation negative regulation of cellular process negative regulation of mesenchymal cell proliferation post-anal tail morphogenesis cellular response to metal ion cellular response to chemical stimulus response to metal ion cellular response to calcium ion response to calcium ion regulation of neuron projection development regulation of cellular component organization positive regulation of cellular component organization cellular developmental process cell projection organization cell development neuron projection development cellular component organization neurogenesis neuron differentiation positive regulation of neuron projection development cell differentiation positive regulation of cell projection organization cellular component organization or biogenesis plasma membrane bounded cell projection organization regulation of cell projection organization nervous system development generation of neurons neuron development regulation of plasma membrane bounded cell projection organization embryonic epithelial tube formation chordate embryonic development tube formation embryo development epithelial tube formation primary neural tube formation embryo development ending in birth or egg hatching morphogenesis of embryonic epithelium neural tube development embryonic morphogenesis neural tube closure neural tube formation tube closure positive regulation of interleukin-8 production positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process cytokine production regulation of cytokine production positive regulation of macromolecule metabolic process regulation of multicellular organismal process regulation of biosynthetic process interleukin-8 production regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression positive regulation of multicellular organismal process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process positive regulation of cytokine production regulation of metabolic process regulation of interleukin-8 production regulation of chemokine production chemokine production positive regulation of chemokine production head development brain morphogenesis forebrain development endocrine system development pituitary gland development diencephalon morphogenesis brain development diencephalon development forebrain morphogenesis hypophysis morphogenesis central nervous system development intracellular signal transduction JNK cascade intracellular signaling cassette MAPK cascade cell fate commitment phospholipase C-activating G protein-coupled receptor signaling pathway G protein-coupled receptor signaling pathway regulation of immune effector process positive regulation of myeloid leukocyte cytokine production involved in immune response positive regulation of immune effector process myeloid leukocyte cytokine production cytokine production involved in immune response production of molecular mediator of immune response regulation of cytokine production involved in immune response immune effector process regulation of macrophage cytokine production positive regulation of cytokine production involved in immune response positive regulation of production of molecular mediator of immune response regulation of production of molecular mediator of immune response positive regulation of macrophage cytokine production macrophage cytokine production negative chemotaxis axonogenesis plasma membrane bounded cell projection morphogenesis cell morphogenesis cell projection morphogenesis taxis neuron projection morphogenesis chemorepulsion of axon locomotion chemotaxis axon guidance axon development cell morphogenesis involved in neuron differentiation dopaminergic neuron axon guidance neuron projection guidance chemorepulsion of dopaminergic neuron axon development of secondary female sexual characteristics sex differentiation mammary gland branching involved in thelarche thelarche development of secondary sexual characteristics female sex differentiation type B pancreatic cell development epithelial cell differentiation epithelial cell development pancreas development endocrine pancreas development enteroendocrine cell differentiation type B pancreatic cell differentiation regulation of developmental process regulation of neuron projection arborization regulation of cell morphogenesis positive regulation of developmental process regulation of anatomical structure morphogenesis positive regulation of neuron projection arborization neuron projection arborization postsynapse organization regulation of postsynapse organization regulation of synapse organization cell junction organization regulation of synapse structure or activity synapse organization regulation of biological quality formation of primary germ layer mesoderm morphogenesis paraxial mesoderm formation mesenchyme morphogenesis mesenchyme development gastrulation paraxial mesoderm development paraxial mesoderm morphogenesis mesoderm formation mesoderm development digestive system development hindgut morphogenesis digestive tract development digestive tract morphogenesis hindgut development primitive streak formation anterior/posterior pattern specification anterior/posterior axis specification gastrulation with mouth forming second axis specification RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process negative regulation of DNA-templated transcription negative regulation of metabolic process primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of DNA-templated transcription negative regulation of RNA metabolic process epithelial cell proliferation melanocyte proliferation fat cell differentiation negative regulation of developmental process regulation of cell differentiation negative regulation of fat cell differentiation negative regulation of cell differentiation regulation of fat cell differentiation response to fibroblast growth factor cellular response to growth factor stimulus negative regulation of signaling negative regulation of cellular response to growth factor stimulus cell surface receptor protein tyrosine kinase signaling pathway negative regulation of cell communication cellular response to endogenous stimulus enzyme-linked receptor protein signaling pathway negative regulation of fibroblast growth factor receptor signaling pathway negative regulation of response to stimulus response to endogenous stimulus regulation of cellular response to growth factor stimulus negative regulation of signal transduction fibroblast growth factor receptor signaling pathway response to growth factor cellular response to fibroblast growth factor stimulus regulation of fibroblast growth factor receptor signaling pathway regulation of macrophage activation positive regulation of macrophage activation regulation of leukocyte activation cell activation regulation of cell activation myeloid leukocyte activation leukocyte activation macrophage activation positive regulation of cell activation positive regulation of leukocyte activation ventricular septum development cardiac septum development cardiac chamber development cardiac ventricle development somitogenesis segmentation somite development negative regulation of programmed cell death negative regulation of apoptotic process inorganic ion homeostasis intracellular calcium ion homeostasis homeostatic process calcium ion homeostasis regulation of postsynaptic cytosolic calcium ion concentration regulation of cytosolic calcium ion concentration cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis positive regulation of mesenchymal cell proliferation positive regulation of cell population proliferation catabolic process positive regulation of protein metabolic process macromolecule catabolic process protein metabolic process regulation of protein metabolic process protein catabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of catabolic process regulation of protein catabolic process polarized epithelial cell differentiation establishment of monopolar cell polarity establishment or maintenance of monopolar cell polarity establishment or maintenance of cell polarity morphogenesis of a polarized epithelium establishment or maintenance of apical/basal cell polarity establishment or maintenance of bipolar cell polarity establishment of epithelial cell apical/basal polarity establishment of cell polarity establishment or maintenance of epithelial cell apical/basal polarity establishment of apical/basal cell polarity establishment of epithelial cell polarity leukocyte apoptotic process positive regulation of thymocyte apoptotic process lymphocyte apoptotic process thymocyte apoptotic process regulation of T cell apoptotic process positive regulation of leukocyte apoptotic process regulation of leukocyte apoptotic process regulation of lymphocyte apoptotic process positive regulation of lymphocyte apoptotic process positive regulation of T cell apoptotic process regulation of thymocyte apoptotic process T cell apoptotic process positive chemotaxis chemoattraction of serotonergic neuron axon chemoattraction of axon serotonergic neuron axon guidance uterus development response to type II interferon cellular response to type II interferon branch elongation involved in mammary gland duct branching epithelial cell proliferation involved in mammary gland duct elongation branch elongation of an epithelium mammary gland epithelial cell proliferation ear morphogenesis embryonic organ morphogenesis ear development sensory organ development sensory organ morphogenesis inner ear development cochlea development inner ear morphogenesis cochlea morphogenesis embryonic organ development cardiac atrium development atrial septum development regulation of localization localization regulation of protein localization macromolecule localization intracellular protein localization wound healing response to wounding olfactory bulb interneuron differentiation central nervous system neuron development central nervous system neuron differentiation olfactory bulb development forebrain generation of neurons olfactory lobe development forebrain neuron development olfactory bulb interneuron development telencephalon development forebrain neuron differentiation ossification positive regulation of ossification regulation of ossification inflammatory response regulation of tumor necrosis factor production positive regulation of tumor necrosis factor superfamily cytokine production tumor necrosis factor superfamily cytokine production positive regulation of tumor necrosis factor production tumor necrosis factor production regulation of tumor necrosis factor superfamily cytokine production endothelial cell proliferation positive regulation of epithelial cell proliferation regulation of endothelial cell proliferation positive regulation of endothelial cell proliferation regulation of epithelial cell proliferation positive regulation of organelle organization sexual reproduction regulation of reproductive process meiotic cell cycle process positive regulation of cell cycle process meiotic nuclear division cell cycle regulation of cell cycle cell cycle process positive regulation of reproductive process regulation of meiotic cell cycle regulation of cell cycle process organelle fission meiotic cell cycle positive regulation of nuclear division positive regulation of meiotic cell cycle regulation of organelle organization positive regulation of cell cycle regulation of meiotic nuclear division organelle organization nuclear division regulation of nuclear division positive regulation of meiotic nuclear division import into cell regulation of transport transport regulation of vesicle-mediated transport establishment of localization vesicle-mediated transport positive regulation of endocytosis positive regulation of transport endocytosis regulation of endocytosis regulation of type II interferon production type II interferon production positive regulation of type II interferon production limb development appendage development embryonic limb morphogenesis embryonic appendage morphogenesis appendage morphogenesis embryonic digit morphogenesis limb morphogenesis establishment of planar polarity establishment of tissue polarity canonical NF-kappaB signal transduction regulation of intracellular signal transduction regulation of canonical NF-kappaB signal transduction stem cell proliferation hemopoiesis hematopoietic stem cell proliferation gonad development male gonad development male sex differentiation development of primary male sexual characteristics development of primary sexual characteristics epithelial to mesenchymal transition mesodermal to mesenchymal transition involved in gastrulation mesenchymal cell differentiation midgut development regulation of inflammatory response positive regulation of inflammatory response regulation of timing of anagen epidermis development molting cycle process regulation of hair cycle anagen hair cycle phase positive regulation of hair follicle maturation skin epidermis development hair follicle development positive regulation of timing of anagen hair follicle maturation regulation of hair follicle maturation regulation of multicellular organismal development biological phase hair cycle developmental maturation positive regulation of hair follicle development skin development anatomical structure maturation molting cycle regulation of hair follicle development hair cycle process axon extension negative regulation of locomotion regulation of growth regulation of cellular component size regulation of neurogenesis negative regulation of chemotaxis regulation of cell development negative regulation of growth negative regulation of cellular component organization negative regulation of axon extension involved in axon guidance negative regulation of cell growth negative regulation of axonogenesis negative regulation of developmental growth regulation of locomotion negative regulation of response to external stimulus negative regulation of multicellular organismal process cell growth regulation of axon extension regulation of nervous system development negative regulation of neurogenesis regulation of axon extension involved in axon guidance regulation of extent of cell growth regulation of axonogenesis negative regulation of nervous system development axon extension involved in axon guidance negative regulation of cell projection organization regulation of cell size neuron projection extension regulation of developmental growth developmental cell growth negative regulation of axon extension regulation of chemotaxis regulation of cell growth negative regulation of neuron projection development negative regulation of cell development regulation of anatomical structure size notochord morphogenesis notochord development regulation of canonical Wnt signaling pathway negative regulation of Wnt signaling pathway negative regulation of canonical Wnt signaling pathway cell surface receptor protein serine/threonine kinase signaling pathway regulation of transmembrane receptor protein serine/threonine kinase signaling pathway negative regulation of BMP signaling pathway BMP signaling pathway cellular response to BMP stimulus regulation of BMP signaling pathway response to BMP transforming growth factor beta receptor superfamily signaling pathway negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway primary heart field specification pigment metabolic process regulation of melanin biosynthetic process pigment biosynthetic process negative regulation of secondary metabolite biosynthetic process melanin metabolic process secondary metabolic process secondary metabolite biosynthetic process regulation of secondary metabolite biosynthetic process regulation of secondary metabolic process negative regulation of melanin biosynthetic process phenol-containing compound metabolic process phenol-containing compound biosynthetic process melanin biosynthetic process interleukin-1 production regulation of interleukin-1 beta production positive regulation of interleukin-1 beta production positive regulation of interleukin-1 production regulation of interleukin-1 production interleukin-1 beta production positive regulation of JNK cascade positive regulation of MAPK cascade regulation of JNK cascade positive regulation of intracellular signal transduction regulation of MAPK cascade Wnt signaling pathway, planar cell polarity pathway trans-synaptic signaling modulation of chemical synaptic transmission chemical synaptic transmission synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling postsynaptic modulation of chemical synaptic transmission secondary palate development roof of mouth development embryonic skeletal system development regulation of stem cell proliferation positive regulation of stem cell proliferation positive regulation of hematopoietic stem cell proliferation regulation of hematopoietic stem cell proliferation negative regulation of epithelial cell proliferation kidney development pericardium morphogenesis morphogenesis of an epithelial sheet pericardium development positive regulation of DNA-templated transcription transcription by RNA polymerase II regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process negative regulation of neural precursor cell proliferation regulation of cell proliferation in midbrain regulation of neural precursor cell proliferation cell proliferation in midbrain midbrain development neural precursor cell proliferation negative regulation of cell proliferation in midbrain embryonic heart tube development embryonic heart tube morphogenesis heart looping determination of bilateral symmetry determination of left/right symmetry specification of symmetry determination of heart left/right asymmetry left/right pattern formation face development regulation of cartilage development positive regulation of cartilage development regulation of branching involved in mammary gland duct morphogenesis regulation of morphogenesis of an epithelium regulation of morphogenesis of a branching structure regulation of animal organ morphogenesis positive regulation of cell adhesion regulation of cell adhesion positive regulation of cell-cell adhesion cell adhesion cell-cell adhesion positive regulation of cell-cell adhesion mediated by cadherin cell-cell adhesion mediated by cadherin regulation of cell-cell adhesion regulation of cell-cell adhesion mediated by cadherin small GTPase-mediated signal transduction regulation of small GTPase mediated signal transduction Rac protein signal transduction regulation of Rac protein signal transduction positive regulation of Rac protein signal transduction positive regulation of small GTPase mediated signal transduction epidermal cell differentiation keratinocyte differentiation positive regulation of locomotion regulation of cell motility endothelial cell migration positive regulation of cell migration positive regulation of endothelial cell migration positive regulation of cell motility regulation of cell migration regulation of endothelial cell migration cell migration cell motility genitalia development female genitalia development vagina development response to transforming growth factor beta cellular response to transforming growth factor beta stimulus epithelium migration tissue migration ameboidal-type cell migration epithelial cell migration interleukin-6 production positive regulation of interleukin-6 production regulation of interleukin-6 production cellular component biogenesis cellular component assembly negative regulation of cell junction assembly cell junction assembly regulation of synapse assembly negative regulation of synapse organization regulation of cellular component biogenesis regulation of cell junction assembly synapse assembly negative regulation of synapse assembly fibroblast proliferation regulation of fibroblast proliferation positive regulation of fibroblast proliferation blastoderm segmentation embryonic pattern specification anterior/posterior axis specification, embryo tripartite regional subdivision embryonic axis specification respiratory tube development lung development respiratory system development response to lipid cellular response to lipopolysaccharide response to oxygen-containing compound cellular response to molecule of bacterial origin response to lipopolysaccharide cellular response to oxygen-containing compound cellular response to biotic stimulus response to bacterium cellular response to lipid response to molecule of bacterial origin prostate gland epithelium morphogenesis prostatic bud formation urogenital system development prostate gland morphogenesis prostate gland development negative regulation of prostatic bud formation morphogenesis of an epithelial bud morphogenesis of an epithelial fold regulation of prostatic bud formation negative regulation of reproductive process regulation of animal organ formation negative regulation of morphogenesis of an epithelium regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction phosphatidylinositol 3-kinase/protein kinase B signal transduction angiogenesis regulation of vasculature development blood vessel development blood vessel morphogenesis positive regulation of angiogenesis vasculature development positive regulation of vasculature development regulation of angiogenesis Wnt signaling pathway, calcium modulating pathway dopaminergic neuron differentiation midbrain dopaminergic neuron differentiation positive regulation of T cell chemotaxis positive regulation of chemotaxis regulation of lymphocyte chemotaxis regulation of mononuclear cell migration regulation of leukocyte chemotaxis positive regulation of lymphocyte migration regulation of leukocyte migration lymphocyte migration positive regulation of leukocyte chemotaxis leukocyte migration regulation of T cell migration regulation of T cell chemotaxis lymphocyte chemotaxis regulation of lymphocyte migration positive regulation of lymphocyte chemotaxis positive regulation of mononuclear cell migration T cell chemotaxis cell chemotaxis positive regulation of T cell migration positive regulation of leukocyte migration mononuclear cell migration T cell migration leukocyte chemotaxis foam cell differentiation macrophage derived foam cell differentiation	cellular anatomical structure extracellular region extracellular space cell surface cell periphery extracellular matrix external encapsulating structure Schaffer collateral - CA1 synapse synapse cell junction glutamatergic synapse postsynapse

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR043158	Wnt, C-terminal domain	Homologous Superfamily
A	IPR018161	Wnt protein, conserved site	Conserved Site
A	IPR005817	Wnt	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.