AF_AFP50553F1

Computed structure model of Achaete-scute homolog 1

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Achaete-scute homolog 1	binding nucleic acid binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity protein binding protein dimerization activity DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding transcription factor binding bHLH transcription factor binding DNA-binding transcription factor binding binding nucleic acid binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity protein binding protein dimerization activity DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding transcription factor binding bHLH transcription factor binding DNA-binding transcription factor binding identical protein binding DNA-binding transcription repressor activity, RNA polymerase II-specific DNA-binding transcription repressor activity RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding chromatin binding E-box binding	multicellular organismal process regulation of cellular process regulation of developmental process cellular developmental process negative regulation of biological process regulation of cell differentiation neurogenesis multicellular organism development neuron differentiation cell differentiation negative regulation of cellular process anatomical structure development negative regulation of cell differentiation system development multicellular organismal process regulation of cellular process regulation of developmental process cellular developmental process negative regulation of biological process regulation of cell differentiation neurogenesis multicellular organism development neuron differentiation cell differentiation negative regulation of cellular process anatomical structure development negative regulation of cell differentiation system development developmental process regulation of biological process negative regulation of developmental process biological regulation nervous system development generation of neurons cellular process negative regulation of neuron differentiation regulation of neuron differentiation neuroblast proliferation cell population proliferation neural precursor cell proliferation central nervous system neuron development cell development central nervous system neuron differentiation central nervous system development neuron development heart development animal organ development circulatory system development regulation of multicellular organismal development regulation of neurogenesis regulation of cell development regulation of nervous system development regulation of multicellular organismal process cell differentiation in spinal cord glial cell fate specification spinal cord development gliogenesis spinal cord oligodendrocyte cell differentiation spinal cord oligodendrocyte cell fate specification cell fate specification oligodendrocyte differentiation glial cell differentiation glial cell fate commitment oligodendrocyte cell fate commitment cell fate commitment oligodendrocyte cell fate specification regulation of biosynthetic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process neuron apoptotic process positive regulation of programmed cell death regulation of apoptotic process positive regulation of biological process regulation of programmed cell death cell death positive regulation of apoptotic process apoptotic process positive regulation of neuron apoptotic process programmed cell death positive regulation of cellular process regulation of neuron apoptotic process sympathetic nervous system development autonomic nervous system development head development neuron fate commitment forebrain development subpallium neuron fate commitment brain development telencephalon development subpallium development pallium development cerebral cortex development pons development medulla oblongata development metencephalon development vestibular nucleus development hindbrain development neural nucleus development response to stimulus response to endogenous stimulus response to epidermal growth factor response to growth factor noradrenergic neuron differentiation noradrenergic neuron development epithelium development tube development respiratory tube development lung epithelium development tissue development epithelial cell differentiation lung epithelial cell differentiation lung cell differentiation lung development respiratory system development positive regulation of nervous system development positive regulation of developmental process positive regulation of cell differentiation positive regulation of neurogenesis positive regulation of cell development positive regulation of multicellular organismal process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of DNA-templated transcription negative regulation of RNA metabolic process cellular response to stimulus cell surface receptor signaling pathway signaling cell communication Notch signaling pathway signal transduction positive regulation of DNA-templated transcription positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process stomach neuroendocrine cell differentiation neuroepithelial cell differentiation neuroendocrine cell differentiation digestive system development digestive tract development columnar/cuboidal epithelial cell differentiation enteroendocrine cell differentiation stomach development cell cycle regulation of cell cycle positive regulation of cell cycle neuron fate specification positive regulation of cell population proliferation positive regulation of neural precursor cell proliferation regulation of cell population proliferation regulation of neural precursor cell proliferation sensory organ development nose development olfactory pit development regulation of mitotic cell cycle mitotic cell cycle gland development adrenal gland development adrenal chromaffin cell differentiation endocrine system development glandular epithelial cell differentiation cell fate commitment involved in pattern specification pattern specification process ventral spinal cord interneuron differentiation spinal cord dorsal/ventral patterning regionalization ventral spinal cord interneuron fate commitment dorsal/ventral pattern formation spinal cord patterning ventral spinal cord development negative regulation of programmed cell death negative regulation of apoptotic process ganglion development sympathetic ganglion development lung neuroendocrine cell differentiation lung secretory cell differentiation response to retinoic acid response to lipid response to chemical response to oxygen-containing compound neuron migration motor neuron migration cell migration cell motility anatomical structure maturation cell maturation developmental maturation cerebral cortex GABAergic interneuron differentiation GABAergic neuron differentiation forebrain generation of neurons cerebral cortex neuron differentiation forebrain neuron differentiation noradrenergic neuron fate commitment carotid body glomus cell differentiation oligodendrocyte development glial cell development peripheral nervous system neuron development peripheral nervous system development peripheral nervous system neuron differentiation positive regulation of neuron differentiation spinal cord association neuron differentiation dorsal spinal cord development regulation of timing of subpallium neuron differentiation regulation of timing of neuron differentiation regulation of development, heterochronic regulation of timing of cell differentiation commitment of neuronal cell to specific neuron type in forebrain forebrain neuron fate commitment multicellular organismal movement musculoskeletal movement system process reflex nervous system process neuromuscular process response to external stimulus musculoskeletal movement, spinal reflex action neuroblast fate commitment neuroblast differentiation cell fate determination neuroblast fate determination response to nutrient levels response to folic acid response to nutrient response to nitrogen compound response to vitamin positive regulation of cell communication positive regulation of signal transduction regulation of signal transduction positive regulation of response to stimulus regulation of signaling regulation of response to stimulus regulation of Notch signaling pathway regulation of cell communication positive regulation of Notch signaling pathway positive regulation of signaling regulation of epithelial cell differentiation response to magnetism cellular response to magnetism response to abiotic stimulus cellular response to abiotic stimulus cellular response to environmental stimulus	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromatin chromosome somatodendritic compartment cell body neuronal cell body RNA polymerase II transcription regulator complex membrane-bounded organelle protein-containing complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromatin chromosome somatodendritic compartment cell body neuronal cell body RNA polymerase II transcription regulator complex membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex transcription regulator complex intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036638	Helix-loop-helix DNA-binding domain superfamily	Homologous Superfamily
A	IPR015660	Achaete-scute transcription factor-related	Family
A	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P50553	intellectual disability congenital central hypoventilation syndrome acute lung injury nervous system disorder small cell lung carcinoma non-small cell lung carcinoma ovarian cancer primitive neuroectodermal tumor small cell carcinoma subependymal giant cell astrocytoma CCHS WITH HIRSCHSPRUNG DISEASE glioblastoma hypothyroidism lung cancer malignant glioma intellectual disability congenital central hypoventilation syndrome acute lung injury nervous system disorder small cell lung carcinoma non-small cell lung carcinoma ovarian cancer primitive neuroectodermal tumor small cell carcinoma subependymal giant cell astrocytoma CCHS WITH HIRSCHSPRUNG DISEASE glioblastoma hypothyroidism lung cancer malignant glioma oligodendroglioma pilocytic astrocytoma astrocytic tumor chronic obstructive pulmonary disease Haddad syndrome lung carcinoma medulloblastoma osteosarcoma pituitary cancer psoriasis atypical teratoid rhabdoid tumor head and neck cancer large cell medulloblastoma malignant ependymoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.