AF_AFP35453F1

Computed structure model of Homeobox protein Hox-D13

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Homeobox protein Hox-D13	DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding chromatin binding transcription regulator activity DNA-binding transcription factor activity DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding chromatin binding transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity	developmental process multicellular organism development multicellular organismal process skeletal system development anatomical structure development system development response to ketone response to lipid response to stimulus response to chemical response to oxygen-containing compound response to testosterone RNA metabolic process primary metabolic process developmental process multicellular organism development multicellular organismal process skeletal system development anatomical structure development system development response to ketone response to lipid response to stimulus response to chemical response to oxygen-containing compound response to testosterone RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process transcription by RNA polymerase II biosynthetic process metabolic process cellular process macromolecule metabolic process axis elongation epithelium development branch elongation of an epithelium developmental growth growth morphogenesis of an epithelium tissue development developmental growth involved in morphogenesis anatomical structure morphogenesis tissue morphogenesis morphogenesis of a branching structure morphogenesis of a branching epithelium morphogenesis of an epithelial fold genitalia development reproductive system development reproductive process sex differentiation animal organ development developmental process involved in reproduction male sex differentiation male genitalia development reproductive structure development regulation of cellular process regulation of primary metabolic process regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation regulation of macromolecule metabolic process regulation of gene expression regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process prostate gland development gland development prostate glandular acinus development prostate gland epithelium morphogenesis gland morphogenesis animal organ morphogenesis urogenital system development prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis prostate glandular acinus morphogenesis prostate gland morphogenesis branching involved in prostate gland morphogenesis cell population proliferation regulation of cell population proliferation regulation of transcription by RNA polymerase II digestive system development tube development embryonic morphogenesis hindgut morphogenesis embryo development digestive tract development tube morphogenesis digestive tract morphogenesis hindgut development embryonic hindgut morphogenesis positive regulation of DNA-templated transcription positive regulation of biological process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process anterior/posterior pattern specification pattern specification process regionalization regulation of developmental process regulation of reproductive process regulation of morphogenesis of an epithelium regulation of multicellular organismal process regulation of anatomical structure morphogenesis regulation of morphogenesis of a branching structure regulation of branching involved in prostate gland morphogenesis limb development appendage development embryonic limb morphogenesis embryonic appendage morphogenesis appendage morphogenesis embryonic digit morphogenesis limb morphogenesis	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle nuclear lumen membraneless organelle intracellular membraneless organelle membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle nuclear lumen membraneless organelle intracellular membraneless organelle chromatin chromosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR017970	Homeobox, conserved site	Conserved Site
A	IPR009057	Homedomain-like superfamily	Homologous Superfamily
A	IPR001356	Homeodomain	Domain
A	IPR022067	Homeobox protein Hox1A3 N-terminal	Domain
A	IPR051003	Anterior-posterior axis regulatory homeobox	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P35453	brachydactyly-syndactyly syndrome VACTERL/vater association syndactyly type 5 brachydactyly type E1 rheumatoid arthritis brachydactyly type D syndactyly synpolydactyly type 1 lymphopenia non-syndromic synpolydactyly anemia Limb Deformities, Congenital neutropenia non-syndromic syndactyly ovarian mucinous adenocarcinoma brachydactyly-syndactyly syndrome VACTERL/vater association syndactyly type 5 brachydactyly type E1 rheumatoid arthritis brachydactyly type D syndactyly synpolydactyly type 1 lymphopenia non-syndromic synpolydactyly anemia Limb Deformities, Congenital neutropenia non-syndromic syndactyly ovarian mucinous adenocarcinoma psoriasis androgenetic alopecia chronic kidney disease large cell medulloblastoma polydactyly hand-foot-genital syndrome osteosarcoma polysyndactyly 4 brachydactyly brachydactyly type E carpal tunnel syndrome intellectual disability lung cancer

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.