AF_AFC1GT20F1

Computed structure model of PKHD-type hydroxylase TPA1

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	PKHD-type hydroxylase TPA1	cation binding transition metal ion binding iron ion binding ion binding binding metal ion binding small molecule binding oxidoreductase activity catalytic activity, acting on a protein oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen peptidyl-proline dioxygenase activity catalytic activity 2-oxoglutarate-dependent dioxygenase activity dioxygenase activity cation binding transition metal ion binding iron ion binding ion binding binding metal ion binding small molecule binding oxidoreductase activity catalytic activity, acting on a protein oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen peptidyl-proline dioxygenase activity catalytic activity 2-oxoglutarate-dependent dioxygenase activity dioxygenase activity organic acid binding carbohydrate binding vitamin binding anion binding monosaccharide binding carboxylic acid binding heterocyclic compound binding L-ascorbic acid binding	regulation of biological process regulation of cellular process biological regulation positive regulation of biological process regulation of macromolecule metabolic process positive regulation of metabolic process positive regulation of macromolecule metabolic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process positive regulation of cellular process regulation of cellular component organization protein-containing complex disassembly regulation of biological process regulation of cellular process biological regulation positive regulation of biological process regulation of macromolecule metabolic process positive regulation of metabolic process positive regulation of macromolecule metabolic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process positive regulation of cellular process regulation of cellular component organization protein-containing complex disassembly protein biosynthetic process regulation of protein-containing complex disassembly regulation of primary metabolic process cellular component organization post-transcriptional regulation of gene expression protein metabolic process translational termination cellular component organization or biogenesis regulation of biosynthetic process cellular component disassembly protein-containing complex organization regulation of protein metabolic process regulation of translational termination primary metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of translation regulation of macromolecule biosynthetic process catabolic process regulation of catabolic process positive regulation of catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR006620	Prolyl 4-hydroxylase, alpha subunit	Domain
A	IPR005123	Oxoglutarate/iron-dependent dioxygenase domain	Domain
A	IPR043044	TPA1/Ofd1, C-terminal	Homologous Superfamily
A	IPR051842	Ribosomal subunit uS12 prolyl hydroxylase	Family
A	IPR039558	Prolyl 3,4-dihydroxylase TPA1/OFD1, N-terminal domain	Domain
A	IPR019601	Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.