9ZNG | pdb_00009zng

Cryo-EM structure of the Methanosarcina acetivorans 70S ribosome in complex with SriD


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth AD]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
I [auth AD]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
H [auth AC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
G [auth AB]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e familyBovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2]. Domain
F [auth AA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
F [auth AA]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
F [auth AA]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
GB [auth BX]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
FB [auth BW]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
CB [auth BT]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
AB [auth BR]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
ZA [auth BQ]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
XA [auth BO]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
WA [auth BN]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
VA [auth BM]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
UA [auth BL]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
TA [auth BK]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
SA [auth BJ]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
RA [auth BI]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
QA [auth BH]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
PA [auth BG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
OA [auth BF]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
OA [auth BF]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
NA [auth BE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
NA [auth BE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
D [auth 7]PF00571CBS domain (CBS)CBS domainCBS domains are small intracellular modules that pair together to form a stable globular domain [2]. This family represents a single CBS domain. Pairs of these domains have been termed a Bateman domain [6]. CBS domains have been shown to bind ligands ...CBS domains are small intracellular modules that pair together to form a stable globular domain [2]. This family represents a single CBS domain. Pairs of these domains have been termed a Bateman domain [6]. CBS domains have been shown to bind ligands with an adenosyl group such as AMP, ATP and S-AdoMet [5]. CBS domains are found attached to a wide range of other protein domains suggesting that CBS domains may play a regulatory role making proteins sensitive to adenosyl carrying ligands. The region containing the CBS domains in Cystathionine-beta synthase is involved in regulation by S-AdoMet [4]. CBS domain pairs from AMPK bind AMP or ATP [5]. The CBS domains from IMPDH and the chloride channel CLC2 bind ATP [5].
Domain
MA [auth BD]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
LA [auth BC]PF07650KH domain (KH_2)KH domainDomain
LA [auth BC]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
KA [auth BB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
EA [auth AZ]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
DA [auth AY]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
CA [auth AX]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
AA [auth AV]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
Z [auth AU]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
Y [auth AT]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
X [auth AS]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
X [auth AS]PF00467KOW motif (KOW)KOW motif- Family
W [auth AR]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
V [auth AQ]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
R [auth AM]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
Q [auth AL]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
P [auth AK]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
O [auth AJ]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
N [auth AI]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
M [auth AH]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
K [auth AF]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
J [auth AE]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth AD]Large ribosomal subunit protein uL5
H [auth AC]Large ribosomal subunit protein uL4
G [auth AB]Large ribosomal subunit protein uL3
IB [auth BZ]DUF5350 family protein- - -
HB [auth BY]Small ribosomal subunit protein eS28
F [auth AA]Large ribosomal subunit protein uL2
GB [auth BX]Small ribosomal subunit protein eS27
FB [auth BW]Small ribosomal subunit protein eS24
EB [auth BV]Putative zinc finger domain-containing protein- - -
DB [auth BU]Small ribosomal subunit protein eS19
CB [auth BT]Small ribosomal subunit protein uS19
BB [auth BS]Small ribosomal subunit protein eS17
AB [auth BR]Small ribosomal subunit protein uS17A
ZA [auth BQ]Small ribosomal subunit protein uS15
YA [auth BP]Small ribosomal subunit protein uS14
XA [auth BO]Small ribosomal subunit protein uS13
E [auth 8]E-site tRNA---
WA [auth BN]Small ribosomal subunit protein uS12
VA [auth BM]Small ribosomal subunit protein uS11
UA [auth BL]Small ribosomal subunit protein uS10
TA [auth BK]Small ribosomal subunit protein eS8
SA [auth BJ]Small ribosomal subunit protein uS9
RA [auth BI]Small ribosomal subunit protein uS8
QA [auth BH]Small ribosomal subunit protein uS7
PA [auth BG]Small ribosomal subunit protein eS6
OA [auth BF]Small ribosomal subunit protein uS5
NA [auth BE]Small ribosomal subunit protein eS4
D [auth 7]CBS domain-containing protein- - -
MA [auth BD]Small ribosomal subunit protein uS4
LA [auth BC]Small ribosomal subunit protein uS3
KA [auth BB]Small ribosomal subunit protein uS2
JA [auth BA]Small ribosomal subunit protein eS1
IA [auth Ad]Large ribosomal subunit protein eL43
HA [auth Ac]Large ribosomal subunit protein eL42
GA [auth Ab]Large ribosomal subunit protein eL40
FA [auth Aa]Large ribosomal subunit protein eL39
EA [auth AZ]Large ribosomal subunit protein eL37
DA [auth AY]Large ribosomal subunit protein eL32
C [auth 3]16S rRNA---
CA [auth AX]Large ribosomal subunit protein eL31
BA [auth AW]Large ribosomal subunit protein eL30
AA [auth AV]Large ribosomal subunit protein uL30
Z [auth AU]Large ribosomal subunit protein uL29
Y [auth AT]Large ribosomal subunit protein eL24
X [auth AS]Large ribosomal subunit protein uL24
W [auth AR]Large ribosomal subunit protein uL23
V [auth AQ]Large ribosomal subunit protein uL22
U [auth AP]Large ribosomal subunit protein eL21
T [auth AO]Large ribosomal subunit protein eL20
B [auth 2]5S rRNA---
S [auth AN]Large ribosomal subunit protein eL19
R [auth AM]Large ribosomal subunit protein eL18
Q [auth AL]Large ribosomal subunit protein uL18
P [auth AK]Large ribosomal subunit protein uL16
O [auth AJ]Large ribosomal subunit protein eL15
N [auth AI]Large ribosomal subunit protein uL15
M [auth AH]Large ribosomal subunit protein uL14
L [auth AG]Large ribosomal subunit protein uL13
K [auth AF]Large ribosomal subunit protein eL8
J [auth AE]Large ribosomal subunit protein uL6
A [auth 1]23S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth AD]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
I [auth AD]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
I [auth AD]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
I [auth AD]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
I [auth AD]IPR022804Large ribosomal subunit protein uL5, archaeaFamily
I [auth AD]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
I [auth AD]IPR002132Large ribosomal subunit protein uL5Family
H [auth AC]IPR019970Large ribosomal subunit protein uL4, archaeaFamily
H [auth AC]IPR002136Large ribosomal subunit protein uL4Family
H [auth AC]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
H [auth AC]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
H [auth AC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
G [auth AB]IPR019928Large ribosomal subunit protein uL3, archaeaFamily
G [auth AB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
G [auth AB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
G [auth AB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
G [auth AB]IPR000597Large ribosomal subunit protein uL3Family
G [auth AB]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
IB [auth BZ]IPR035258Protein of unknown function DUF5350Family
HB [auth BY]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
HB [auth BY]IPR000289Small ribosomal subunit protein eS28Family
F [auth AA]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
F [auth AA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
F [auth AA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
F [auth AA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
F [auth AA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
F [auth AA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
F [auth AA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
F [auth AA]IPR002171Large ribosomal subunit protein uL2Family
GB [auth BX]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
GB [auth BX]IPR000592Small ribosomal subunit protein eS27Family
GB [auth BX]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FB [auth BW]IPR001976Small ribosomal subunit protein eS24Family
FB [auth BW]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
FB [auth BW]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
FB [auth BW]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
EB [auth BV]IPR044720Small ribosomal subunit protein aS21Family
EB [auth BV]IPR011668Ribosomal protein aS21, zinc-binding pocketDomain
DB [auth BU]IPR001266Small ribosomal subunit protein eS19Family
DB [auth BU]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
DB [auth BU]IPR027548Small ribosomal subunit protein eS19, archaeaFamily
DB [auth BU]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
CB [auth BT]IPR002222Small ribosomal subunit protein uS19Family
CB [auth BT]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
CB [auth BT]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
CB [auth BT]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
BB [auth BS]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
BB [auth BS]IPR001210Small ribosomal subunit protein eS17Family
BB [auth BS]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
AB [auth BR]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
AB [auth BR]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AB [auth BR]IPR000266Small ribosomal subunit protein uS17Family
AB [auth BR]IPR019978Small ribosomal subunit protein uS17, archaealFamily
AB [auth BR]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
ZA [auth BQ]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
ZA [auth BQ]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
ZA [auth BQ]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
ZA [auth BQ]IPR000589Small ribosomal subunit protein uS15Family
YA [auth BP]IPR001209Small ribosomal subunit protein uS14Family
YA [auth BP]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
YA [auth BP]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
YA [auth BP]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
YA [auth BP]IPR023676Small ribosomal subunit protein uS14, archaeaFamily
XA [auth BO]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
XA [auth BO]IPR001892Small ribosomal subunit protein uS13Family
XA [auth BO]IPR019977Small ribosomal subunit protein uS13, archaeaFamily
XA [auth BO]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
XA [auth BO]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
WA [auth BN]IPR006032Small ribosomal subunit protein uS12Family
WA [auth BN]IPR022863Ribosomal protein uS12, archaeaFamily
WA [auth BN]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
WA [auth BN]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
VA [auth BM]IPR019961Small ribosomal subunit protein uS11, archaeaFamily
VA [auth BM]IPR001971Small ribosomal subunit protein uS11Family
VA [auth BM]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
VA [auth BM]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
UA [auth BL]IPR001848Small ribosomal subunit protein uS10Family
UA [auth BL]IPR027486Small ribosomal subunit protein uS10 domainDomain
UA [auth BL]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
UA [auth BL]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
UA [auth BL]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
TA [auth BK]IPR001047Small ribosomal subunit protein eS8Family
TA [auth BK]IPR020919Small ribosomal subunit protein eS8, archaeaFamily
TA [auth BK]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
TA [auth BK]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
SA [auth BJ]IPR019958Small ribosomal subunit protein uS9, archaeaFamily
SA [auth BJ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
SA [auth BJ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
SA [auth BJ]IPR000754Small ribosomal subunit protein uS9Family
SA [auth BJ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
RA [auth BI]IPR000630Small ribosomal subunit protein uS8Family
RA [auth BI]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
RA [auth BI]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
QA [auth BH]IPR000235Small ribosomal subunit protein uS7Family
QA [auth BH]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
QA [auth BH]IPR026018Small ribosomal subunit protein uS7, archaeaFamily
QA [auth BH]IPR023798Small ribosomal subunit protein uS7 domainDomain
QA [auth BH]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
PA [auth BG]IPR001377Small ribosomal subunit protein eS6Family
PA [auth BG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
PA [auth BG]IPR020924Small ribosomal subunit protein eS6, archaeaFamily
OA [auth BF]IPR005711Small ribosomal subunit protein uS5, eukaryota_archaeaFamily
OA [auth BF]IPR000851Small ribosomal subunit protein uS5Family
OA [auth BF]IPR047866Small ribosomal subunit protein uS5, archaeaFamily
OA [auth BF]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
OA [auth BF]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
OA [auth BF]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
OA [auth BF]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
OA [auth BF]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
NA [auth BE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
NA [auth BE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
NA [auth BE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
NA [auth BE]IPR000876Small ribosomal subunit protein eS4Family
NA [auth BE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
NA [auth BE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
NA [auth BE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
NA [auth BE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
NA [auth BE]IPR005824KOWDomain
D [auth 7]IPR051462CBS domain-containing proteinFamily
D [auth 7]IPR046342CBS domain superfamilyHomologous Superfamily
D [auth 7]IPR000644CBS domainDomain
MA [auth BD]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
MA [auth BD]IPR002942RNA-binding S4 domainDomain
MA [auth BD]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
MA [auth BD]IPR022802Small ribosomal subunit protein uS4, archaeaFamily
MA [auth BD]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
MA [auth BD]IPR022801Small ribosomal subunit protein uS4Family
MA [auth BD]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
LA [auth BC]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
LA [auth BC]IPR027488Small ribosomal subunit protein uS3, archaeaFamily
LA [auth BC]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
LA [auth BC]IPR057258Small ribosomal subunit protein uS3Family
LA [auth BC]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
LA [auth BC]IPR004087K Homology domainDomain
LA [auth BC]IPR004044K Homology domain, type 2Domain
LA [auth BC]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
LA [auth BC]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
KA [auth BB]IPR023454Small ribosomal subunit protein uS2, archaeaFamily
KA [auth BB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
KA [auth BB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
KA [auth BB]IPR001865Small ribosomal subunit protein uS2Family
KA [auth BB]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
JA [auth BA]IPR001593Small ribosomal subunit protein eS1Family
JA [auth BA]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
JA [auth BA]IPR030838Small ribosomal subunit protein eS1, archaeaFamily
IA [auth Ad]IPR002674Large ribosomal subunit protein eL43Family
IA [auth Ad]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
IA [auth Ad]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
IA [auth Ad]IPR050522Eukaryotic ribosomal protein eL43Family
HA [auth Ac]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
HA [auth Ac]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth Ac]IPR000552Large ribosomal subunit protein eL42Family
GA [auth Ab]IPR023657Large ribosomal subunit protein eL40, archaeaFamily
GA [auth Ab]IPR001975Large ribosomal subunit protein eL40 domainDomain
GA [auth Ab]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
GA [auth Ab]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FA [auth Aa]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
FA [auth Aa]IPR000077Large ribosomal subunit protein eL39Family
FA [auth Aa]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
EA [auth AZ]IPR001569Large ribosomal subunit protein eL37Family
EA [auth AZ]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
EA [auth AZ]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EA [auth AZ]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
DA [auth AY]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
DA [auth AY]IPR023654Large ribosomal subunit protein eL32, archaeaFamily
DA [auth AY]IPR001515Large ribosomal subunit protein eL32Family
DA [auth AY]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
CA [auth AX]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
CA [auth AX]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
CA [auth AX]IPR000054Large ribosomal subunit protein eL31Family
BA [auth AW]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
BA [auth AW]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
BA [auth AW]IPR000231Large ribosomal subunit protein eL30Family
BA [auth AW]IPR039109Large ribosomal subunit protein eL30-likeFamily
BA [auth AW]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
AA [auth AV]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
AA [auth AV]IPR039699Large ribosomal subunit protein uL30Family
AA [auth AV]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
AA [auth AV]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
AA [auth AV]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
AA [auth AV]IPR005997Large ribosomal subunit protein uL30, archaeaFamily
Z [auth AU]IPR001854Large ribosomal subunit protein uL29Family
Z [auth AU]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
Z [auth AU]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
Y [auth AT]IPR011017TRASH domainDomain
Y [auth AT]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
Y [auth AT]IPR055345Large ribosomal subunit protein eL24-like, archaeaFamily
Y [auth AT]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Y [auth AT]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
X [auth AS]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
X [auth AS]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
X [auth AS]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
X [auth AS]IPR005824KOWDomain
X [auth AS]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth AS]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
W [auth AR]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
W [auth AR]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
W [auth AR]IPR019985Large ribosomal subunit protein uL23Family
W [auth AR]IPR013025Large ribosomal subunit protein uL23-likeFamily
V [auth AQ]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
V [auth AQ]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
V [auth AQ]IPR001063Large ribosomal subunit protein uL22Family
V [auth AQ]IPR057265Large ribosomal subunit protein uL22, archaeaFamily
U [auth AP]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
U [auth AP]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
U [auth AP]IPR022856Large ribosomal subunit protein eL21, archaeaFamily
U [auth AP]IPR001147Large ribosomal subunit protein eL21Family
U [auth AP]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth AO]IPR028877Large ribosomal subunit protein eL20Family
T [auth AO]IPR023573Large ribosomal subunit protein eL20 domainDomain
S [auth AN]IPR015974Large ribosomal subunit protein eL19, domain 3Homologous Superfamily
S [auth AN]IPR039547Large ribosomal subunit protein eL19Family
S [auth AN]IPR057260Ribosomal protein L19e, C-terminal domainDomain
S [auth AN]IPR033936Large ribosomal subunit protein eL19, archaeaDomain
S [auth AN]IPR015973Large ribosomal subunit protein eL19, domain 2Homologous Superfamily
S [auth AN]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
S [auth AN]IPR057259Ribosomal protein L19e, N-terminal domainDomain
S [auth AN]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
S [auth AN]IPR000196Large ribosomal subunit protein eL19 domainDomain
R [auth AM]IPR022947Large ribosomal subunit protein eL18, archaeaFamily
R [auth AM]IPR021131Large ribosomal subunit protein uL15/eL18Domain
R [auth AM]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
R [auth AM]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
R [auth AM]IPR000039Large ribosomal subunit protein eL18Family
R [auth AM]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Q [auth AL]IPR057268Large ribosomal subunit protein uL18Family
Q [auth AL]IPR057267Large ribosomal subunit protein uL18, archaeaFamily
Q [auth AL]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
P [auth AK]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
P [auth AK]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
P [auth AK]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
P [auth AK]IPR022981Large ribosomal subunit protein uL16, archaeaFamily
P [auth AK]IPR016180Large ribosomal subunit protein uL16 domainDomain
P [auth AK]IPR047873Large ribosomal subunit protein uL16Family
O [auth AJ]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
O [auth AJ]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
O [auth AJ]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
O [auth AJ]IPR020926Large ribosomal subunit protein eL15, archaealFamily
O [auth AJ]IPR000439Large ribosomal subunit protein eL15Family
N [auth AI]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
N [auth AI]IPR021131Large ribosomal subunit protein uL15/eL18Domain
N [auth AI]IPR030878Large ribosomal subunit protein uL15Family
N [auth AI]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
N [auth AI]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
M [auth AH]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
M [auth AH]IPR000218Large ribosomal subunit protein uL14Family
M [auth AH]IPR019971Large ribosomal subunit protein uL14, archaeaFamily
M [auth AH]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
L [auth AG]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
L [auth AG]IPR005822Large ribosomal subunit protein uL13Family
L [auth AG]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
L [auth AG]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
L [auth AG]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
K [auth AF]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
K [auth AF]IPR022481Large ribosomal subunit protein eL8, archaeaFamily
K [auth AF]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
K [auth AF]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
K [auth AF]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
J [auth AE]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
J [auth AE]IPR019907Large ribosomal subunit protein uL6, archaeaFamily
J [auth AE]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
J [auth AE]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
J [auth AE]IPR000702Large ribosomal subunit protein uL6-likeFamily