9YPZ | pdb_00009ypz

Vacant ribosome with P-site tRNA, substate 1, Structure Ia


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth E]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
H [auth D]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
RB [auth YY]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
G [auth C]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
G [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
G [auth C]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
QB [auth XX]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
PB [auth WW]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
OB [auth VV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
NB [auth UU]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
MB [auth TT]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
LB [auth SS]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
JB [auth QQ]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
IB [auth PP]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
F [auth B]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
GB [auth NN]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1]. Domain
GB [auth NN]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
FB [auth MM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
EB [auth LL]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
EB [auth LL]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
DB [auth KK]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
CB [auth JJ]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
CB [auth JJ]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
BB [auth II]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
ZA [auth GG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
ZA [auth GG]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
YA [auth FF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
YA [auth FF]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
XA [auth EE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
XA [auth EE]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
XA [auth EE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
XA [auth EE]PF00467KOW motif (KOW)KOW motif- Family
E [auth A]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
E [auth A]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
E [auth A]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
WA [auth DD]PF07650KH domain (KH_2)KH domainDomain
WA [auth DD]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
WA [auth DD]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
VA [auth CC]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
VA [auth CC]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28eDomain
VA [auth CC]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
UA [auth BB]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
TA [auth AA]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
TA [auth AA]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
CA [auth Z]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
CA [auth Z]PF00467KOW motif (KOW)KOW motif- Family
BA [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
BA [auth Y]PF00467KOW motif (KOW)KOW motif- Family
AA [auth X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
Z [auth W]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
Y [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
V [auth S]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
U [auth R]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
U [auth R]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
T [auth Q]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
S [auth P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
S [auth P]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
Q [auth N]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
Q [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
P [auth M]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e familyBovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2]. Domain
P [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
O [auth L]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
N [auth K]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
N [auth K]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
M [auth J]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
M [auth J]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
M [auth J]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
L [auth I]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
L [auth I]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
K [auth H]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
K [auth H]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
J [auth G]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth E]60S ribosomal protein L6
DC [auth j]Ribosomal protein L37
BC [auth 13],
CC [auth 11]
Met-tRNA---
H [auth D]Large ribosomal subunit protein uL18
AC [auth 10]MF mRNA---
ZB [auth gg]RACK1
YB [auth ff]Ribosomal protein S27a
XB [auth ee]40S ribosomal protein S30
WB [auth dd]eS29
VB [auth cc]Ribosomal protein S28
UB [auth bb]40S ribosomal protein S27
TB [auth aa]40S ribosomal protein S26
SB [auth ZZ]eS25
RB [auth YY]40S ribosomal protein S24
G [auth C]60S ribosomal protein L4
QB [auth XX]uS12
PB [auth WW]Ribosomal protein S15a
OB [auth VV]eS21
NB [auth UU]uS10
MB [auth TT]eS19
LB [auth SS]uS13
KB [auth RR]eS17
JB [auth QQ]uS9
IB [auth PP]uS19
HB [auth OO]Small ribosomal subunit protein uS11
F [auth B]Ribosomal protein L3
GB [auth NN]Ribosomal protein S13
FB [auth MM]40S ribosomal protein S12
EB [auth LL]Ribosomal protein S11
DB [auth KK]S10_plectin domain-containing protein -
CB [auth JJ]Ribosomal protein S9 (Predicted)
BB [auth II]40S ribosomal protein S8
AB [auth HH]40S ribosomal protein S7
ZA [auth GG]40S ribosomal protein S6
YA [auth FF]Ribosomal protein S5
XA [auth EE]eS4 (S4 X isoform)
E [auth A]Ribosomal protein L8
WA [auth DD]Ribosomal protein S3
VA [auth CC]Small ribosomal subunit protein uS5
UA [auth BB]40S ribosomal protein S3a
TA [auth AA]uS2 (SA)
SA [auth r]eL28
RA [auth p]eL43
QA [auth o]Large ribosomal subunit protein eL42
PA [auth n]eL41
OA [auth m]Ubiquitin A-52 residue ribosomal protein fusion product 1
NA [auth l]eL39
D [auth 9]18S ribosomal RNA---
MA [auth k]eL38
LA [auth i]60S ribosomal protein L36
KA [auth h]eL35
JA [auth g]Large ribosomal subunit protein eL34
IA [auth f]eL33
HA [auth e]Ribosomal protein L32
GA [auth d]eL31
FA [auth c]eL30
EA [auth b]Large ribosomal subunit protein eL29
DA [auth a]60S ribosomal protein L27a
C [auth 8]5.8S ribosomal RNA---
CA [auth Z]60S ribosomal protein L27
BA [auth Y]uL24
AA [auth X]eL23
Z [auth W]eL24
Y [auth V]Ribosomal protein L23
X [auth U]eL22
W [auth T]eL21
V [auth S]60S ribosomal protein L18a
U [auth R]Ribosomal protein L19
T [auth Q]Ribosomal protein L18
B [auth 7]5S ribosomal RNA---
S [auth P]Large ribosomal subunit protein uL22
R [auth O]Large ribosomal subunit protein uL13
Q [auth N]Ribosomal protein L15
P [auth M]60S ribosomal protein L14
O [auth L]60S ribosomal protein L13- - -
N [auth K]60S ribosomal protein L7
M [auth J]Ribosomal protein L11
L [auth I]60S ribosomal protein L10
K [auth H]60S ribosomal protein L9
J [auth G]60S ribosomal protein L7a -
A [auth 5]28S ribosomal RNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth E]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
I [auth E]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
I [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
I [auth E]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
I [auth E]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
I [auth E]IPR000915Large ribosomal subunit protein eL6Family
DC [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
DC [auth j]IPR001569Large ribosomal subunit protein eL37Family
DC [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
DC [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
H [auth D]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
H [auth D]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
ZB [auth gg]IPR019775WD40 repeat, conserved siteConserved Site
ZB [auth gg]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
ZB [auth gg]IPR045223Small ribosomal subunit protein RACK1-likeFamily
ZB [auth gg]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
ZB [auth gg]IPR001680WD40 repeatRepeat
ZB [auth gg]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
YB [auth ff]IPR019954Ubiquitin conserved siteConserved Site
YB [auth ff]IPR000626Ubiquitin-like domainDomain
YB [auth ff]IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
YB [auth ff]IPR002906Small ribosomal subunit protein eS31Domain
YB [auth ff]IPR019956Ubiquitin domainDomain
YB [auth ff]IPR050158Ubiquitin and ubiquitin-likeFamily
YB [auth ff]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
YB [auth ff]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XB [auth ee]IPR039415Ubiquitin-like protein FUBIDomain
XB [auth ee]IPR019956Ubiquitin domainDomain
XB [auth ee]IPR019954Ubiquitin conserved siteConserved Site
XB [auth ee]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
XB [auth ee]IPR000626Ubiquitin-like domainDomain
XB [auth ee]IPR006846Small ribosomal subunit protein eS30Family
WB [auth dd]IPR001209Small ribosomal subunit protein uS14Family
WB [auth dd]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
WB [auth dd]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
WB [auth dd]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
VB [auth cc]IPR028626Ribosomal protein eS28 conserved siteConserved Site
VB [auth cc]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
VB [auth cc]IPR000289Small ribosomal subunit protein eS28Family
UB [auth bb]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
UB [auth bb]IPR000592Small ribosomal subunit protein eS27Family
UB [auth bb]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
TB [auth aa]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
TB [auth aa]IPR000892Small ribosomal subunit protein eS26Family
TB [auth aa]IPR047864Ribosomal protein eS26, conserved siteConserved Site
SB [auth ZZ]IPR004977Small ribosomal subunit protein eS25Family
SB [auth ZZ]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
RB [auth YY]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
RB [auth YY]IPR001976Small ribosomal subunit protein eS24Family
RB [auth YY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
RB [auth YY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
G [auth C]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
G [auth C]IPR002136Large ribosomal subunit protein uL4Family
G [auth C]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
G [auth C]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
G [auth C]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
QB [auth XX]IPR006032Small ribosomal subunit protein uS12Family
QB [auth XX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
QB [auth XX]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
PB [auth WW]IPR000630Small ribosomal subunit protein uS8Family
PB [auth WW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
PB [auth WW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
OB [auth VV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
OB [auth VV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
OB [auth VV]IPR001931Small ribosomal subunit protein eS21Family
NB [auth UU]IPR001848Small ribosomal subunit protein uS10Family
NB [auth UU]IPR027486Small ribosomal subunit protein uS10 domainDomain
NB [auth UU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
NB [auth UU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
NB [auth UU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
MB [auth TT]IPR001266Small ribosomal subunit protein eS19Family
MB [auth TT]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
MB [auth TT]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
MB [auth TT]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
LB [auth SS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
LB [auth SS]IPR001892Small ribosomal subunit protein uS13Family
LB [auth SS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
LB [auth SS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
KB [auth RR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
KB [auth RR]IPR001210Small ribosomal subunit protein eS17Family
KB [auth RR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
JB [auth QQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
JB [auth QQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
JB [auth QQ]IPR000754Small ribosomal subunit protein uS9Family
JB [auth QQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IB [auth PP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
IB [auth PP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
IB [auth PP]IPR002222Small ribosomal subunit protein uS19Family
IB [auth PP]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
HB [auth OO]IPR001971Small ribosomal subunit protein uS11Family
HB [auth OO]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
HB [auth OO]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
F [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
F [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
F [auth B]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
F [auth B]IPR000597Large ribosomal subunit protein uL3Family
F [auth B]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
GB [auth NN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
GB [auth NN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
GB [auth NN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
GB [auth NN]IPR000589Small ribosomal subunit protein uS15Family
FB [auth MM]IPR000530Small ribosomal subunit protein eS12Family
FB [auth MM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
FB [auth MM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
FB [auth MM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
EB [auth LL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
EB [auth LL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
EB [auth LL]IPR000266Small ribosomal subunit protein uS17Family
EB [auth LL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
EB [auth LL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
DB [auth KK]IPR037447Small ribosomal subunit protein eS10Family
DB [auth KK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
DB [auth KK]IPR005326Plectin/eS10, N-terminalDomain
CB [auth JJ]IPR002942RNA-binding S4 domainDomain
CB [auth JJ]IPR022801Small ribosomal subunit protein uS4Family
CB [auth JJ]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
CB [auth JJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
CB [auth JJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
CB [auth JJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
BB [auth II]IPR001047Small ribosomal subunit protein eS8Family
BB [auth II]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotaHomologous Superfamily
BB [auth II]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
BB [auth II]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
AB [auth HH]IPR000554Small ribosomal subunit protein eS7Family
AB [auth HH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
ZA [auth GG]IPR014401Small ribosomal subunit protein eS6-likeFamily
ZA [auth GG]IPR001377Small ribosomal subunit protein eS6Family
ZA [auth GG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
YA [auth FF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
YA [auth FF]IPR000235Small ribosomal subunit protein uS7Family
YA [auth FF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
YA [auth FF]IPR023798Small ribosomal subunit protein uS7 domainDomain
YA [auth FF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
XA [auth EE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
XA [auth EE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
XA [auth EE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
XA [auth EE]IPR002942RNA-binding S4 domainDomain
XA [auth EE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
XA [auth EE]IPR000876Small ribosomal subunit protein eS4Family
XA [auth EE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
XA [auth EE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
XA [auth EE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
XA [auth EE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
XA [auth EE]IPR005824KOWDomain
E [auth A]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
E [auth A]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
E [auth A]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
E [auth A]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
E [auth A]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
E [auth A]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth A]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
E [auth A]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
E [auth A]IPR002171Large ribosomal subunit protein uL2Family
WA [auth DD]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
WA [auth DD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
WA [auth DD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
WA [auth DD]IPR004044K Homology domain, type 2Domain
WA [auth DD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
WA [auth DD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
WA [auth DD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
VA [auth CC]IPR005711Small ribosomal subunit protein uS5, eukaryota_archaeaFamily
VA [auth CC]IPR000851Small ribosomal subunit protein uS5Family
VA [auth CC]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
VA [auth CC]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
VA [auth CC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
VA [auth CC]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
VA [auth CC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
UA [auth BB]IPR001593Small ribosomal subunit protein eS1Family
UA [auth BB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
UA [auth BB]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
TA [auth AA]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
TA [auth AA]IPR027498Small ribosomal subunit protein uS2, eukaryotaFamily
TA [auth AA]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
TA [auth AA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
TA [auth AA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
TA [auth AA]IPR001865Small ribosomal subunit protein uS2Family
TA [auth AA]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
SA [auth r]IPR029004Ribosomal eL28/Mak16Domain
SA [auth r]IPR002672Large ribosomal subunit protein eL28Family
RA [auth p]IPR002674Large ribosomal subunit protein eL43Family
RA [auth p]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth p]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
QA [auth o]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
QA [auth o]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
QA [auth o]IPR000552Large ribosomal subunit protein eL42Family
PA [auth n]IPR007836Large ribosomal subunit protein eS32Family
OA [auth m]IPR019956Ubiquitin domainDomain
OA [auth m]IPR019954Ubiquitin conserved siteConserved Site
OA [auth m]IPR050158Ubiquitin and ubiquitin-likeFamily
OA [auth m]IPR001975Large ribosomal subunit protein eL40 domainDomain
OA [auth m]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
OA [auth m]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
OA [auth m]IPR000626Ubiquitin-like domainDomain
NA [auth l]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
NA [auth l]IPR000077Large ribosomal subunit protein eL39Family
NA [auth l]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
MA [auth k]IPR002675Large ribosomal subunit protein eL38Family
MA [auth k]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
LA [auth i]IPR000509Large ribosomal subunit protein eL36Family
LA [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
KA [auth h]IPR001854Large ribosomal subunit protein uL29Family
KA [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
KA [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
KA [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
JA [auth g]IPR008195Large ribosomal subunit protein eL34Family
JA [auth g]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
JA [auth g]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
IA [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
IA [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IA [auth f]IPR001780Large ribosomal subunit protein eL33Family
IA [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
HA [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
HA [auth e]IPR001515Large ribosomal subunit protein eL32Family
HA [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
GA [auth d]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
GA [auth d]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
GA [auth d]IPR000054Large ribosomal subunit protein eL31Family
FA [auth c]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
FA [auth c]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
FA [auth c]IPR000231Large ribosomal subunit protein eL30Family
FA [auth c]IPR039109Large ribosomal subunit protein eL30-likeFamily
FA [auth c]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
EA [auth b]IPR002673Large ribosomal subunit protein eL29Family
DA [auth a]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
DA [auth a]IPR021131Large ribosomal subunit protein uL15/eL18Domain
DA [auth a]IPR030878Large ribosomal subunit protein uL15Family
DA [auth a]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
DA [auth a]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
CA [auth Z]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
CA [auth Z]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
CA [auth Z]IPR005824KOWDomain
CA [auth Z]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth Z]IPR001141Large ribosomal subunit protein eL27Family
CA [auth Z]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
BA [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
BA [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
BA [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
BA [auth Y]IPR005824KOWDomain
BA [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
AA [auth X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
AA [auth X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
AA [auth X]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
AA [auth X]IPR019985Large ribosomal subunit protein uL23Family
AA [auth X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
AA [auth X]IPR013025Large ribosomal subunit protein uL23-likeFamily
Z [auth W]IPR011017TRASH domainDomain
Z [auth W]IPR056366Large ribosomal subunit protein eL24Family
Z [auth W]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
Z [auth W]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Z [auth W]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
Y [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
Y [auth V]IPR000218Large ribosomal subunit protein uL14Family
Y [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
X [auth U]IPR002671Large ribosomal subunit protein eL22Family
X [auth U]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
W [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
W [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
W [auth T]IPR001147Large ribosomal subunit protein eL21Family
W [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
V [auth S]IPR028877Large ribosomal subunit protein eL20Family
V [auth S]IPR023573Large ribosomal subunit protein eL20 domainDomain
V [auth S]IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
U [auth R]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
U [auth R]IPR057259Ribosomal protein L19e, N-terminal domainDomain
U [auth R]IPR039547Large ribosomal subunit protein eL19Family
U [auth R]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
U [auth R]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
U [auth R]IPR057260Ribosomal protein L19e, C-terminal domainDomain
U [auth R]IPR000196Large ribosomal subunit protein eL19 domainDomain
U [auth R]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
T [auth Q]IPR021131Large ribosomal subunit protein uL15/eL18Domain
T [auth Q]IPR000039Large ribosomal subunit protein eL18Family
T [auth Q]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
S [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
S [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
S [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
S [auth P]IPR001063Large ribosomal subunit protein uL22Family
R [auth O]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
R [auth O]IPR005822Large ribosomal subunit protein uL13Family
R [auth O]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
R [auth O]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
Q [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Q [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
Q [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
Q [auth N]IPR000439Large ribosomal subunit protein eL15Family
P [auth M]IPR039660Large ribosomal subunit protein eL14Family
P [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
P [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
P [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
N [auth K]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
N [auth K]IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
N [auth K]IPR039699Large ribosomal subunit protein uL30Family
N [auth K]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
N [auth K]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
N [auth K]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
M [auth J]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
M [auth J]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
M [auth J]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
M [auth J]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
M [auth J]IPR002132Large ribosomal subunit protein uL5Family
L [auth I]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
L [auth I]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth I]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
L [auth I]IPR016180Large ribosomal subunit protein uL16 domainDomain
L [auth I]IPR047873Large ribosomal subunit protein uL16Family
K [auth H]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
K [auth H]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
K [auth H]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
K [auth H]IPR000702Large ribosomal subunit protein uL6-likeFamily
J [auth G]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
J [auth G]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth G]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth G]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
J [auth G]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily