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 9YOA | pdb_00009yoa

Crystal structure of integrin a4b1 headpiece in complex with Bio-1211 (Mn)


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF18372Integrin beta epidermal growth factor like domain 1 (I-EGF_1)Integrin beta epidermal growth factor like domain 1This is the I-EGF 1 domain found in several integrin betas such as integrin beta 1-7. Structural analysis reveal an epidermal growth factor-like (I-EGF) domains 1 and 2 [1]. EGF1 lacks one disulfide (C2-C4) relative to the integrin EGF 2, 3, and 4 do ...This is the I-EGF 1 domain found in several integrin betas such as integrin beta 1-7. Structural analysis reveal an epidermal growth factor-like (I-EGF) domains 1 and 2 [1]. EGF1 lacks one disulfide (C2-C4) relative to the integrin EGF 2, 3, and 4 domains, this allows the C-terminal end of EGF1 to flex remarkably relative to its N-terminal end [14].
Domain
PF17205Integrin plexin domain (PSI_integrin)Integrin plexin domainThis short disulphide rich domain is found at the N-terminus of integrin beta chains. Domain
PF00362Integrin beta chain VWA domain (Integrin_beta)Integrin beta chain VWA domainIntegrins have been found in animals and their homologues have also been found in cyanobacteria, probably due to horizontal gene transfer [1]. This domain corresponds to the integrin beta VWA domain. Domain
PF01839FG-GAP repeat (FG-GAP)FG-GAP repeat- Repeat
PF08441Integrin alpha Ig-like domain 1 (Integrin_A_Ig_1)Integrin alpha Ig-like domain 1This domain is found in integrin alpha and integrin alpha precursors to the C terminus of a number of Pfam:PF01839 repeats and to the N-terminus of the Pfam:PF00357 cytoplasmic region. This region is composed of an immunoglobulin-like domain. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth D]Bio-1211---
Integrin beta-1
Integrin alpha-4,Integrin alpha-V heavy chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR033760Integrin beta N-terminalDomain
IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
IPR032695Integrin domain superfamilyHomologous Superfamily
IPR002369Integrin beta subunit, VWA domainDomain
IPR040622Integrin beta, epidermal growth factor-like domain 1Domain
IPR036349Integrin beta tail domain superfamilyHomologous Superfamily
IPR014836Integrin beta subunit, cytoplasmic domainDomain
IPR012896Integrin beta subunit, tailDomain
IPR013111Epidermal growth factor-like domain, extracellularDomain
IPR057073Integrin beta, epidermal growth factor-like domain 2Domain
IPR015812Integrin beta subunitFamily
IPR057243Integrins beta, I-EGF domain, conserved siteConserved Site
IPR016201PSI domainDomain
IPR013517FG-GAP repeatRepeat
IPR048286Integrin alpha, third immunoglobulin-like domainDomain
IPR013649Integrin alpha, first immunoglubulin-like domainDomain
IPR048285Integrin alpha, second immunoglobulin-like domainDomain
IPR032695Integrin domain superfamilyHomologous Superfamily
IPR013519Integrin alpha beta-propellorRepeat
IPR000413Integrin alpha chainFamily
IPR028994Integrin alpha, N-terminalHomologous Superfamily
IPR018184Integrin alpha chain, C-terminal cytoplasmic region, conserved siteConserved Site
IPR013517FG-GAP repeatRepeat
IPR013519Integrin alpha beta-propellorRepeat
IPR000413Integrin alpha chainFamily
IPR048286Integrin alpha, third immunoglobulin-like domainDomain
IPR013649Integrin alpha, first immunoglubulin-like domainDomain
IPR028994Integrin alpha, N-terminalHomologous Superfamily
IPR048285Integrin alpha, second immunoglobulin-like domainDomain
IPR032695Integrin domain superfamilyHomologous Superfamily
IPR018184Integrin alpha chain, C-terminal cytoplasmic region, conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
:  P05556
:  P13612