9Y8P | pdb_00009y8p

Cryo-EM structure of Thermotoga maritima encapsulin shell

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
ZA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
Z	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
YA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
Y	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
XA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
WA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
VA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
UA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
U [auth T]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
TA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
T [auth S]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
SA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
S [auth R]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
RA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
R [auth Q]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
QA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
Q [auth P]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
PA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
P [auth O]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
OA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
O [auth N]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
NA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
N [auth M]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
MA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
M [auth L]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
LA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
L [auth K]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
KA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
K [auth J]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
JA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
J [auth I]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
IA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
I [auth H]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
HB	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
HA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
H [auth G]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
GB	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
GA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
G [auth F]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
FB	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
FA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
F [auth E]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
EB	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
EA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
E [auth D]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
DB	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
DA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
D [auth C]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
CB	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
CA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
BB	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
BA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
B [auth A]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
AB	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
AA	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)
A [auth U]	SCOP2B Superfamily	Phage coat protein-like	8054151	3001529	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth U], AA, AB, B [auth A], BA, A [auth U], AA, AB, B [auth A], BA, BB, C [auth B], CA, CB, D [auth C], DA, DB, E [auth D], EA, EB, F [auth E], FA, FB, G [auth F], GA, GB, H [auth G], HA, HB, I [auth H], IA, J [auth I], JA, K [auth J], KA, L [auth K], LA, M [auth L], MA, N [auth M], NA, O [auth N], OA, P [auth O], PA, Q [auth P], QA, R [auth Q], RA, S [auth R], SA, T [auth S], TA, U [auth T], UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA	PF04454	Encapsulating protein for peroxidase (Linocin_M18)	Encapsulating protein for peroxidase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth U], AA, AB, B [auth A], BA, A [auth U], AA, AB, B [auth A], BA, BB, C [auth B], CA, CB, D [auth C], DA, DB, E [auth D], EA, EB, F [auth E], FA, FB, G [auth F], GA, GB, H [auth G], HA, HB, I [auth H], IA, J [auth I], JA, K [auth J], KA, L [auth K], LA, M [auth L], MA, N [auth M], NA, O [auth N], OA, P [auth O], PA, Q [auth P], QA, R [auth Q], RA, S [auth R], SA, T [auth S], TA, U [auth T], UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA	Type 1 encapsulin shell protein	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity	intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport monoatomic ion transport monoatomic cation transport establishment of localization metal ion transport proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle encapsulin nanocompartment

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth U], AA, AB, B [auth A], BA, A [auth U], AA, AB, B [auth A], BA, BB, C [auth B], CA, CB, D [auth C], DA, DB, E [auth D], EA, EB, F [auth E], FA, FB, G [auth F], GA, GB, H [auth G], HA, HB, I [auth H], IA, J [auth I], JA, K [auth J], KA, L [auth K], LA, M [auth L], MA, N [auth M], NA, O [auth N], OA, P [auth O], PA, Q [auth P], QA, R [auth Q], RA, S [auth R], SA, T [auth S], TA, U [auth T], UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA	IPR007544	Type 1 encapsulin shell protein	Family
A [auth U], AA, AB, B [auth A], BA, A [auth U], AA, AB, B [auth A], BA, BB, C [auth B], CA, CB, D [auth C], DA, DB, E [auth D], EA, EB, F [auth E], FA, FB, G [auth F], GA, GB, H [auth G], HA, HB, I [auth H], IA, J [auth I], JA, K [auth J], KA, L [auth K], LA, M [auth L], MA, N [auth M], NA, O [auth N], OA, P [auth O], PA, Q [auth P], QA, R [auth Q], RA, S [auth R], SA, T [auth S], TA, U [auth T], UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA	IPR051429	Encapsulin nanocompartment	Family