9XZY | pdb_00009xzy

DEPDC5 dimer (tandem DEPDC5) focused map

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth H]	GATOR1 complex protein DEPDC5	small GTPase binding protein binding binding enzyme binding GTPase binding protein-containing complex binding GTPase regulator activity enzyme regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity molecular function regulator activity	cellular response to stimulus regulation of cellular process response to stimulus signaling negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of biological process regulation of signal transduction intracellular signal transduction negative regulation of cell communication cell communication negative regulation of TORC1 signaling regulation of intracellular signal transduction negative regulation of TOR signaling negative regulation of cellular process cellular response to stimulus regulation of cellular process response to stimulus signaling negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of biological process regulation of signal transduction intracellular signal transduction negative regulation of cell communication cell communication negative regulation of TORC1 signaling regulation of intracellular signal transduction negative regulation of TOR signaling negative regulation of cellular process signal transduction regulation of TORC1 signaling TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling negative regulation of response to stimulus biological regulation negative regulation of signal transduction regulation of response to stimulus regulation of cell communication cellular process TORC1 signaling response to nutrient levels cellular response to amino acid starvation cellular response to starvation cellular response to nutrient levels cellular response to stress response to stress response to amino acid starvation response to starvation positive regulation of autophagy catabolic process autophagy positive regulation of biological process regulation of catabolic process regulation of autophagy positive regulation of catabolic process positive regulation of metabolic process metabolic process process utilizing autophagic mechanism regulation of metabolic process positive regulation of cellular process	vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle lysosomal membrane cytoplasm vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle lysosomal membrane cytoplasm organelle membrane lysosome cytosol perinuclear region of cytoplasm protein-containing complex GATOR1 complex Seh1-associated complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth H]	IPR048255	Vacuolar membrane-associated protein Iml1, N-terminal domain	Domain
A [auth H]	IPR000591	DEP domain	Domain
A [auth H]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
A [auth H]	IPR045838	DEPDC5, C-terminal	Domain
A [auth H]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
A [auth H]	IPR055213	IML1/DEPDC5, N-terminal double psi beta-barrel domain	Domain
A [auth H]	IPR027244	Vacuolar membrane-associated protein Iml1	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth H]	Pharos: O75140	epilepsy, familial focal, with variable foci 1 epilepsy Autosomal dominant epilepsy with auditory features Epileptic encephalopathy hepatitis C virus infection autosomal dominant nocturnal frontal lobe epilepsy episodic kinesigenic dyskinesia 1 hepatocellular carcinoma cleft lip epilepsy, familial temporal lobe, 1 familial focal epilepsy with variable foci intellectual disability

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.