9XOU | pdb_00009xou

CryoEM structure of LacY with Trimbody


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyAldolase 8033008 3000445 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyAldolase 8033008 3000445 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyAldolase 8033008 3000445 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyMFS general substrate transporter 8039139 3000310 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyMFS general substrate transporter 8039139 3000310 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyMFS general substrate transporter 8039139 3000310 SCOP2B (2022-06-29)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
D, E, F
Heavy ChainIGHV1 -lactose permease | h3-prac-5350a,2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase SAbDab (2026-03-27)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF01081KDPG and KHG aldolase (Aldolase)KDPG and KHG aldolaseThis family includes the following members: 4-hydroxy-2-oxoglutarate aldolase (KHG-aldolase) Phospho-2-dehydro-3-deoxygluconate aldolase (KDPG-aldolase) Domain
G, H, I
PF01306LacY proton/sugar symporter (LacY_symp)LacY proton/sugar symporter- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
H3-PrAC-5350A,2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase -
G, H, I
Lactose permease
D, E, F
LacY-nanobody-TAIL---