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 9XIC | pdb_00009xic

SARS-CoV-2 Omicron JD.1.1 spike trimer (S-6P) in complex with 3 R102-9 Fabs and 3 C092 Fabs (3 RBD up)

External Resource: Annotation


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth M],
J [auth N],
O		Light chain of R102-9 Fab---
D,
I [auth E],
N [auth F]		Heavy chain of R102-9 Fab---
C [auth L],
H [auth J],
M [auth K]		Light chain of C092 Fab---
B [auth H],
G,
L [auth I]		Heavy chain of C092 Fab---
A,
F [auth B],
K [auth C]		Spike glycoprotein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
F [auth B],
K [auth C]		IPR044873Spike glycoprotein S2, coronavirus, heptad repeat 1Domain
A,
F [auth B],
K [auth C]		IPR044366Spike (S) protein S1 subunit, receptor-binding domain, SARS-CoV-2Domain
A,
F [auth B],
K [auth C]		IPR018548Spike (S) protein S1 subunit, receptor-binding domain, betacoronavirusDomain
A,
F [auth B],
K [auth C]		IPR044341Spike (S) protein S1 subunit, N-terminal domain, SARS-CoV-likeDomain
A,
F [auth B],
K [auth C]		IPR032500Spike glycoprotein S1, N-terminal domain, betacoronavirus-likeDomain
A,
F [auth B],
K [auth C]		IPR042578Spike glycoprotein, betacoronavirusFamily
A,
F [auth B],
K [auth C]		IPR036326Spike S1 subunit, receptor binding domain superfamily, betacoronavirusHomologous Superfamily
A,
F [auth B],
K [auth C]		IPR043002Spike glycoprotein, N-terminal domain superfamilyHomologous Superfamily
A,
F [auth B],
K [auth C]		IPR044874Spike glycoprotein S2, coronavirus, heptad repeat 2Domain
A,
F [auth B],
K [auth C]		IPR043473Spike glycoprotein S2 superfamily, coronavirusHomologous Superfamily
A,
F [auth B],
K [auth C]		IPR043607Coronavirus spike glycoprotein S1, C-terminalDomain
A,
F [auth B],
K [auth C]		IPR002552Spike glycoprotein S2, coronavirusDomain