9XFK | pdb_00009xfk

In situ structure of bacterial 50S ribosomes


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth I]23S rRNA---
B [auth J]5S rRNA---
C [auth K]Large ribosomal subunit protein uL2
D [auth L]Large ribosomal subunit protein uL3
E [auth M]50S ribosomal protein L4
F [auth N]50S ribosomal protein L5
G [auth O]Large ribosomal subunit protein uL6
H [auth P]50S ribosomal protein L9
I [auth Q]50S ribosomal protein L11
J [auth R]50S ribosomal protein L13
K [auth S]Large ribosomal subunit protein uL14
L [auth T]50S ribosomal protein L15
M [auth U]Large ribosomal subunit protein uL16
N [auth V]Large ribosomal subunit protein bL17
O [auth W]50S ribosomal protein L18
P [auth X]50S ribosomal protein L19
Q [auth Y]50S ribosomal protein L20
R [auth Z]50S ribosomal protein L21
S [auth a]50S ribosomal protein L22
T [auth b]50S ribosomal protein L23
U [auth c]Large ribosomal subunit protein uL24
V [auth d]50S ribosomal protein L25
W [auth e]50S ribosomal protein L27
X [auth f]50S ribosomal protein L28
Y [auth g]50S ribosomal protein L29
Z [auth h]50S ribosomal protein L30
AA [auth i]Large ribosomal subunit protein bL32
BA [auth j]50S ribosomal protein L33
CA [auth k]50S ribosomal protein L34
DA [auth l]50S ribosomal protein L35
EA [auth m]50S ribosomal protein L36

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth K]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
C [auth K]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth K]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth K]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth K]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
C [auth K]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth K]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth K]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth K]IPR002171Large ribosomal subunit protein uL2Family
D [auth L]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth L]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
D [auth L]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth L]IPR000597Large ribosomal subunit protein uL3Family
E [auth M]IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth M]IPR002136Large ribosomal subunit protein uL4Family
E [auth M]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
F [auth N]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
F [auth N]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
F [auth N]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
F [auth N]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
F [auth N]IPR002132Large ribosomal subunit protein uL5Family
F [auth N]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
G [auth O]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
G [auth O]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
G [auth O]IPR000702Large ribosomal subunit protein uL6-likeFamily
G [auth O]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
G [auth O]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
H [auth P]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
H [auth P]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
H [auth P]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
H [auth P]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
H [auth P]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
H [auth P]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
H [auth P]IPR000244Large ribosomal subunit protein bL9Family
I [auth Q]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
I [auth Q]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
I [auth Q]IPR000911Ribosomal protein uL11Family
I [auth Q]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
I [auth Q]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
I [auth Q]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
I [auth Q]IPR006519Large ribosomal subunit protein uL11, bacteriaFamily
J [auth R]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
J [auth R]IPR005822Large ribosomal subunit protein uL13Family
J [auth R]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
J [auth R]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
K [auth S]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
K [auth S]IPR000218Large ribosomal subunit protein uL14Family
K [auth S]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
K [auth S]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
L [auth T]IPR021131Large ribosomal subunit protein uL15/eL18Domain
L [auth T]IPR030878Large ribosomal subunit protein uL15Family
L [auth T]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
L [auth T]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
L [auth T]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
M [auth U]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
M [auth U]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
M [auth U]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
M [auth U]IPR016180Large ribosomal subunit protein uL16 domainDomain
M [auth U]IPR047873Large ribosomal subunit protein uL16Family
N [auth V]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
N [auth V]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
N [auth V]IPR000456Large ribosomal subunit protein bL17Family
O [auth W]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
O [auth W]IPR057268Large ribosomal subunit protein uL18Family
O [auth W]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
P [auth X]IPR001857Large ribosomal subunit protein bL19Family
P [auth X]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
P [auth X]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
P [auth X]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth Y]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
Q [auth Y]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
Q [auth Y]IPR005813Large ribosomal subunit protein bL20Family
R [auth Z]IPR028909Large ribosomal subunit protein bL21-likeFamily
R [auth Z]IPR001787Large ribosomal subunit protein bL21Family
R [auth Z]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
R [auth Z]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
S [auth a]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
S [auth a]IPR001063Large ribosomal subunit protein uL22Family
S [auth a]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
S [auth a]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
S [auth a]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
T [auth b]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
T [auth b]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
T [auth b]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
T [auth b]IPR013025Large ribosomal subunit protein uL23-likeFamily
U [auth c]IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
U [auth c]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
U [auth c]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth c]IPR003256Large ribosomal subunit protein uL24Family
U [auth c]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
U [auth c]IPR005824KOWDomain
U [auth c]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
V [auth d]IPR020055Ribosomal protein bL25, short-formFamily
V [auth d]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
V [auth d]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
V [auth d]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
V [auth d]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
W [auth e]IPR001684Large ribosomal subunit protein bL27Family
W [auth e]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
X [auth f]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
X [auth f]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
X [auth f]IPR026569Large ribosomal subunit protein bL28Family
X [auth f]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
Y [auth g]IPR050063Universal ribosomal protein uL29Family
Y [auth g]IPR001854Large ribosomal subunit protein uL29Family
Y [auth g]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
Y [auth g]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
Z [auth h]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
Z [auth h]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
Z [auth h]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
Z [auth h]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
AA [auth i]IPR002677Large ribosomal subunit protein bL32Family
AA [auth i]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth i]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
BA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth j]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BA [auth j]IPR001705Large ribosomal subunit protein bL33Family
BA [auth j]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
CA [auth k]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
CA [auth k]IPR000271Large ribosomal subunit protein bL34Family
DA [auth l]IPR021137Large ribosomal subunit protein bL35-likeFamily
DA [auth l]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
DA [auth l]IPR001706Large ribosomal subunit protein bL35Family
DA [auth l]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
EA [auth m]IPR000473Large ribosomal subunit protein bL36Family
EA [auth m]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily