Annotations: 9X5F

Cryo-EM structure of Medicago truncatula GA3-GID1b-DELLA1 ternary complex

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth A]	DELLA protein 1	transcription regulator activity DNA-binding transcription factor activity sequence-specific DNA binding DNA binding binding nucleic acid binding	developmental process multicellular organismal process regulation of biological process regulation of multicellular organismal development regulation of developmental process negative regulation of developmental process negative regulation of biological process biological regulation regulation of seedling development seed germination negative regulation of post-embryonic development seedling development multicellular organism development regulation of post-embryonic development negative regulation of seed germination developmental process multicellular organismal process regulation of biological process regulation of multicellular organismal development regulation of developmental process negative regulation of developmental process negative regulation of biological process biological regulation regulation of seedling development seed germination negative regulation of post-embryonic development seedling development multicellular organism development regulation of post-embryonic development negative regulation of seed germination regulation of seed germination anatomical structure development regulation of multicellular organismal process post-embryonic development negative regulation of multicellular organismal process regulation of reproductive process reproductive process developmental process involved in reproduction seed dormancy process fruit development seed development regulation of seed maturation reproductive structure development seed maturation system development reproductive system development regulation of seed development multicellular organismal reproductive process plant gross anatomical part developmental process developmental maturation regulation of seed dormancy process dormancy process animal gross anatomical part developmental process cellular response to stimulus cellular response to gibberellin stimulus regulation of cellular process response to lipid response to stimulus signaling hormone-mediated signaling pathway cell communication response to gibberellin cellular response to endogenous stimulus response to hormone signal transduction cellular response to hormone stimulus gibberellin mediated signaling pathway response to endogenous stimulus gibberellic acid mediated signaling pathway response to oxygen-containing compound cellular response to oxygen-containing compound cellular response to chemical stimulus response to chemical cellular response to lipid cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process response to abscisic acid response to alcohol transcription by RNA polymerase II regulation of transcription by RNA polymerase II positive regulation of DNA-templated transcription positive regulation of biological process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process cellular response to nutrient levels response to nutrient levels cellular response to phosphate starvation cellular response to stress response to stress response to starvation cellular response to starvation negative regulation of signaling regulation of signal transduction negative regulation of cell communication negative regulation of cellular process regulation of signaling negative regulation of response to stimulus negative regulation of gibberellic acid mediated signaling pathway regulation of gibberellic acid mediated signaling pathway negative regulation of signal transduction regulation of response to stimulus regulation of cell communication response to symbiont biological process involved in interspecies interaction between organisms response to other organism response to symbiotic fungus response to external stimulus response to external biotic stimulus response to fungus response to biotic stimulus arbuscular mycorrhizal association biological process involved in symbiotic interaction	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle
A [auth B]	Gibberellin receptor GID1c-like protein	organic acid binding binding ion binding anion binding isoprenoid binding gibberellin binding lipid binding carboxylic acid binding hormone binding small molecule binding hydrolase activity, acting on ester bonds carboxylesterase activity carboxylic ester hydrolase activity hydrolase activity organic acid binding binding ion binding anion binding isoprenoid binding gibberellin binding lipid binding carboxylic acid binding hormone binding small molecule binding hydrolase activity, acting on ester bonds carboxylesterase activity carboxylic ester hydrolase activity hydrolase activity catalytic activity	developmental process multicellular organismal process reproductive system development fruit morphogenesis reproductive process plant gross anatomical part developmental process developmental process involved in reproduction post-embryonic plant morphogenesis anatomical structure morphogenesis multicellular organism development fruit development anatomical structure development reproductive structure development animal gross anatomical part developmental process developmental process multicellular organismal process reproductive system development fruit morphogenesis reproductive process plant gross anatomical part developmental process developmental process involved in reproduction post-embryonic plant morphogenesis anatomical structure morphogenesis multicellular organism development fruit development anatomical structure development reproductive structure development animal gross anatomical part developmental process system development cellular response to stimulus cellular response to gibberellin stimulus regulation of cellular process response to lipid response to stimulus signaling hormone-mediated signaling pathway cell communication response to gibberellin cellular response to endogenous stimulus response to hormone signal transduction cellular response to hormone stimulus gibberellin mediated signaling pathway regulation of biological process response to endogenous stimulus gibberellic acid mediated signaling pathway biological regulation response to oxygen-containing compound cellular response to oxygen-containing compound cellular response to chemical stimulus response to chemical cellular response to lipid cellular process reproductive shoot system development post-embryonic development plant organ development flower development post-embryonic plant organ morphogenesis plant organ morphogenesis post-embryonic plant organ development shoot system development floral organ morphogenesis floral organ development positive regulation of cell communication positive regulation of signal transduction positive regulation of gibberellic acid mediated signaling pathway positive regulation of biological process regulation of signal transduction positive regulation of response to stimulus positive regulation of cellular process regulation of signaling regulation of gibberellic acid mediated signaling pathway regulation of response to stimulus regulation of cell communication positive regulation of signaling	cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth A]	IPR038088	DELLA, N-terminal domain superfamily	Homologous Superfamily
B [auth A]	IPR005202	Transcription factor GRAS	Family
B [auth A]	IPR021914	Transcriptional factor DELLA, N-terminal	Domain
A [auth B]	IPR033140	Lipase, GDXG, putative serine active site	Active Site
A [auth B]	IPR050466	Carboxylesterases/Gibberellin receptors	Family
A [auth B]	IPR002168	Acyl esterase GDXG, putative histidine active site	Active Site
A [auth B]	IPR013094	Alpha/beta hydrolase fold-3	Domain
A [auth B]	IPR029058	Alpha/Beta hydrolase fold	Homologous Superfamily

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9X5F | pdb_00009x5f

Cryo-EM structure of Medicago truncatula GA3-GID1b-DELLA1 ternary complex

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage