Annotations: 9WN3

Crystal structure of W27-Fab in complex with an epitope peptide from serine hydroxymethyltransferase (SHMT)

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, F	Serine hydroxymethyltransferase	threonine aldolase activity L-allo-threonine aldolase activity lyase activity catalytic activity carbon-carbon lyase activity aldehyde-lyase activity identical protein binding protein binding binding protein homodimerization activity protein dimerization activity vitamin binding vitamin B6 binding pyridoxal phosphate binding threonine aldolase activity L-allo-threonine aldolase activity lyase activity catalytic activity carbon-carbon lyase activity aldehyde-lyase activity identical protein binding protein binding binding protein homodimerization activity protein dimerization activity vitamin binding vitamin B6 binding pyridoxal phosphate binding ion binding anion binding heterocyclic compound binding small molecule binding transferase activity, transferring one-carbon groups glycine hydroxymethyltransferase activity transferase activity hydroxymethyl-, formyl- and related transferase activity cation binding transition metal ion binding zinc ion binding metal ion binding	folic acid-containing compound metabolic process modified amino acid metabolic process metabolic process cellular process tetrahydrofolate metabolic process pteridine-containing compound metabolic process folic acid-containing compound biosynthetic process modified amino acid biosynthetic process biosynthetic process tetrahydrofolate interconversion pteridine-containing compound biosynthetic process small molecule metabolic process tetrahydrofolate biosynthetic process one-carbon metabolic process folic acid-containing compound metabolic process modified amino acid metabolic process metabolic process cellular process tetrahydrofolate metabolic process pteridine-containing compound metabolic process folic acid-containing compound biosynthetic process modified amino acid biosynthetic process biosynthetic process tetrahydrofolate interconversion pteridine-containing compound biosynthetic process small molecule metabolic process tetrahydrofolate biosynthetic process one-carbon metabolic process catabolic process oxoacid metabolic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process L-serine catabolic process L-serine metabolic process proteinogenic amino acid metabolic process proteinogenic amino acid catabolic process carboxylic acid catabolic process small molecule catabolic process amino acid catabolic process small molecule biosynthetic process L-serine biosynthetic process carboxylic acid biosynthetic process amino acid biosynthetic process proteinogenic amino acid biosynthetic process serine family amino acid biosynthetic process glycine metabolic process glycine catabolic process	cellular anatomical structure membrane intracellular anatomical structure cytoplasm cytosol
B, E, H	W27-FAB (LIGHT CHAIN)	-	-	-
A, D, G	W27-FAB (HEAVY CHAIN)	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, F	IPR015421	Pyridoxal phosphate-dependent transferase, major domain	Homologous Superfamily
C, F	IPR015422	Pyridoxal phosphate-dependent transferase, small domain	Homologous Superfamily
C, F	IPR039429	Serine hydroxymethyltransferase-like domain	Domain
C, F	IPR001085	Serine hydroxymethyltransferase	Family
C, F	IPR015424	Pyridoxal phosphate-dependent transferase	Homologous Superfamily
C, F	IPR049943	Serine hydroxymethyltransferase-like	Family
C, F	IPR019798	Serine hydroxymethyltransferase, pyridoxal phosphate binding site	Binding Site

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9WN3 | pdb_00009wn3

Crystal structure of W27-Fab in complex with an epitope peptide from serine hydroxymethyltransferase (SHMT)

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage