9WDH | pdb_00009wdh

Crystal Structure of CBL-B in Complex with a Potent Inhibitor Demonstrating In Vivo Efficacy

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	E3 ubiquitin-protein ligase CBL-B	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding phosphoprotein binding phosphotyrosine residue binding protein binding protein phosphorylated amino acid binding aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity cation binding ion binding binding calcium ion binding metal ion binding small molecule binding phosphoprotein binding phosphotyrosine residue binding protein binding protein phosphorylated amino acid binding aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity transferase activity catalytic activity ubiquitin-protein transferase activity protein tyrosine kinase binding kinase binding signaling receptor binding receptor tyrosine kinase binding enzyme binding protein kinase binding transition metal ion binding zinc ion binding	regulation of protein stability biological regulation regulation of biological quality protein stabilization regulation protein catabolic process at synapse regulation of biological process catabolic process regulation of cellular process metabolic process cellular process regulation of catabolic process regulation of metabolic process regulation protein catabolic process at postsynapse cellular response to stimulus regulation of protein stability biological regulation regulation of biological quality protein stabilization regulation protein catabolic process at synapse regulation of biological process catabolic process regulation of cellular process metabolic process cellular process regulation of catabolic process regulation of metabolic process regulation protein catabolic process at postsynapse cellular response to stimulus response to stimulus signaling negative regulation of signaling negative regulation of ERBB signaling pathway negative regulation of biological process regulation of signal transduction cell surface receptor protein tyrosine kinase signaling pathway negative regulation of cell communication cell communication regulation of epidermal growth factor receptor signaling pathway negative regulation of cellular process epidermal growth factor receptor signaling pathway signal transduction enzyme-linked receptor protein signaling pathway regulation of signaling regulation of ERBB signaling pathway cell surface receptor signaling pathway negative regulation of response to stimulus negative regulation of signal transduction regulation of response to stimulus negative regulation of epidermal growth factor receptor signaling pathway ERBB signaling pathway regulation of cell communication establishment of protein localization cellular localization NLS-bearing protein import into nucleus nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport immune response-regulating cell surface receptor signaling pathway positive regulation of biological process regulation of antigen receptor-mediated signaling pathway negative regulation of antigen receptor-mediated signaling pathway positive regulation of response to stimulus immune response-activating signaling pathway immune response-regulating signaling pathway positive regulation of immune response regulation of immune system process positive regulation of immune system process immune response-activating cell surface receptor signaling pathway immune response regulation of T cell receptor signaling pathway T cell receptor signaling pathway negative regulation of T cell receptor signaling pathway negative regulation of immune system process immune system process regulation of immune response antigen receptor-mediated signaling pathway activation of immune response protein polyubiquitination primary metabolic process protein K63-linked ubiquitination protein ubiquitination macromolecule modification protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal platelet-derived growth factor receptor-alpha signaling pathway platelet-derived growth factor receptor signaling pathway regulation of platelet-derived growth factor receptor signaling pathway regulation of platelet-derived growth factor receptor-alpha signaling pathway multicellular organismal process regulation of leukocyte activation regulation of cell activation lymphocyte activation negative regulation of lymphocyte activation leukocyte cell-cell adhesion negative regulation of cell adhesion leukocyte activation cell adhesion cell-cell adhesion T cell activation regulation of multicellular organismal process regulation of cell-cell adhesion regulation of cell adhesion cell activation regulation of T cell activation negative regulation of cell activation negative regulation of T cell activation negative regulation of leukocyte cell-cell adhesion negative regulation of cell-cell adhesion regulation of leukocyte cell-cell adhesion negative regulation of multicellular organismal process negative regulation of leukocyte activation regulation of lymphocyte activation import into cell regulation of localization regulation of cellular component organization receptor internalization postsynaptic neurotransmitter receptor internalization regulation of receptor internalization vesicle-mediated transport vesicle-mediated transport in synapse cellular component organization regulation of postsynaptic neurotransmitter receptor internalization cellular component organization or biogenesis regulation of endocytosis regulation of transport regulation of receptor-mediated endocytosis regulation of vesicle-mediated transport neurotransmitter receptor internalization regulation of postsynaptic membrane neurotransmitter receptor levels postsynaptic endocytosis endocytosis receptor-mediated endocytosis	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane membrane membrane microdomain membrane raft synapse cell junction glutamatergic synapse postsynapse

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR036860	SH2 domain superfamily	Homologous Superfamily
A, B	IPR024159	Adaptor protein Cbl, PTB domain	Domain
A, B	IPR039520	E3 ubiquitin-protein ligase CBL-B, RING finger, HC subclass	Domain
A, B	IPR003153	Adaptor protein Cbl, N-terminal helical	Domain
A, B	IPR011992	EF-hand domain pair	Homologous Superfamily
A, B	IPR015940	Ubiquitin-associated domain	Domain
A, B	IPR018957	Zinc finger, C3HC4 RING-type	Domain
A, B	IPR017907	Zinc finger, RING-type, conserved site	Conserved Site
A, B	IPR024162	Adaptor protein Cbl	Family
A, B	IPR014741	Adaptor protein Cbl, EF hand-like	Domain
A, B	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
A, B	IPR014742	Adaptor protein Cbl, SH2-like domain	Domain
A, B	IPR036537	Adaptor protein Cbl, N-terminal domain superfamily	Homologous Superfamily
A, B	IPR001841	Zinc finger, RING-type	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	: Q13191	experimental autoimmune encephalomyelitis multiple sclerosis pancreatic intraductal papillary-mucinous carcinoma Pick disease acute myeloid leukemia Barrett esophagus dermatomyositis glioblastoma malignant pancreatic neoplasm Multiple Sclerosis, Acute Fulminating ovarian cancer pancreatic intraductal papillary-mucinous neoplasm primitive neuroectodermal tumor adrenoleukodystrophy congenital anemia experimental autoimmune encephalomyelitis multiple sclerosis pancreatic intraductal papillary-mucinous carcinoma Pick disease acute myeloid leukemia Barrett esophagus dermatomyositis glioblastoma malignant pancreatic neoplasm Multiple Sclerosis, Acute Fulminating ovarian cancer pancreatic intraductal papillary-mucinous neoplasm primitive neuroectodermal tumor adrenoleukodystrophy congenital anemia esophageal adenocarcinoma juvenile dermatomyositis medulloblastoma myopathy pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia subependymal giant cell astrocytoma astrocytic tumor lung cancer oligodendroglioma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.