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 9VTQ | pdb_00009vtq

Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in full R-loop state 1

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
K [auth H]Chlorophyllase2e9vtqH1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Chlorophyllase2ECOD (v295.2)
I [auth F]Chlorophyllase2e9vtqF1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Chlorophyllase2ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
L [auth I],
M [auth J]		TniQ- - -
K [auth H]CRISPR-associated protein, Csy4 family -
J [auth G]CRISPR-associated protein Csy2- - -
Type I-F CRISPR-associated protein Csy3- - -
C [auth 3]Non-target strand DNA---
B [auth 2]Target strand DNA---
A [auth 1]crRNA from Vibrio parahaemolyticus---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
L [auth I],
M [auth J]		IPR009492TniQDomain
K [auth H]IPR013396CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPESTFamily
K [auth H]IPR042564CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST superfamilyHomologous Superfamily
J [auth G]IPR013398Type I-F CRISPR-associated protein Csy2Family
IPR013399Type I-F CRISPR-associated protein Csy3Family