9VLZ | pdb_00009vlz

CryoEM structure of GasderminE-N pore

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth J], AA [auth W], B [auth X], BA [auth K], C [auth Y], A [auth J], AA [auth W], B [auth X], BA [auth K], C [auth Y], D [auth A], E [auth Z], F [auth B], G [auth C], H [auth L], I [auth a], J [auth E], K [auth F], L [auth O], M [auth G], N [auth Q], O [auth S], P [auth D], Q [auth b], R [auth P], S [auth M], T [auth R], U [auth T], V [auth H], W [auth N], X [auth U], Y [auth V], Z [auth I]	Gasdermin-E, N-terminal	ion binding binding phosphatidylinositol-4,5-bisphosphate binding anion binding phosphatidylinositol bisphosphate binding phospholipid binding lipid binding phosphatidylinositol phosphate binding small molecule binding wide pore channel activity passive transmembrane transporter activity channel activity transporter activity transmembrane transporter activity ion binding binding phosphatidylinositol-4,5-bisphosphate binding anion binding phosphatidylinositol bisphosphate binding phospholipid binding lipid binding phosphatidylinositol phosphate binding small molecule binding wide pore channel activity passive transmembrane transporter activity channel activity transporter activity transmembrane transporter activity phosphatidylglycerol binding cardiolipin binding	response to peptide cellular response to tumor necrosis factor response to stimulus response to chemical response to cytokine cellular response to cytokine stimulus response to tumor necrosis factor cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction signaling positive regulation of biological process regulation of signal transduction response to peptide cellular response to tumor necrosis factor response to stimulus response to chemical response to cytokine cellular response to cytokine stimulus response to tumor necrosis factor cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette signal transduction positive regulation of cellular process regulation of biological process regulation of signaling positive regulation of MAPK cascade biological regulation positive regulation of intracellular signal transduction regulation of MAPK cascade regulation of response to stimulus MAPK cascade regulation of cell communication cellular process positive regulation of signaling response to tumor cell positive regulation of response to biotic stimulus regulation of response to biotic stimulus positive regulation of immune response to tumor cell immune response to tumor cell immune response regulation of immune response to tumor cell regulation of response to tumor cell response to biotic stimulus positive regulation of immune response immune system process regulation of immune response regulation of immune system process positive regulation of immune system process positive regulation of response to tumor cell negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation negative regulation of cellular process negative regulation of biological process multicellular organismal process system process sensory perception nervous system process sensory perception of sound sensory perception of mechanical stimulus regulation of programmed cell death regulation of intrinsic apoptotic signaling pathway positive regulation of apoptotic signaling pathway intrinsic apoptotic signaling pathway positive regulation of programmed cell death regulation of apoptotic process cell death positive regulation of apoptotic process apoptotic signaling pathway positive regulation of intrinsic apoptotic signaling pathway apoptotic process programmed cell death regulation of apoptotic signaling pathway defense response response to stress pyroptotic cell death pyroptotic inflammatory response inflammatory response cellular response to virus biological process involved in interspecies interaction between organisms response to other organism response to external stimulus response to external biotic stimulus response to virus	cellular anatomical structure membrane intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth J], AA [auth W], B [auth X], BA [auth K], C [auth Y], A [auth J], AA [auth W], B [auth X], BA [auth K], C [auth Y], D [auth A], E [auth Z], F [auth B], G [auth C], H [auth L], I [auth a], J [auth E], K [auth F], L [auth O], M [auth G], N [auth Q], O [auth S], P [auth D], Q [auth b], R [auth P], S [auth M], T [auth R], U [auth T], V [auth H], W [auth N], X [auth U], Y [auth V], Z [auth I]	IPR040460	Gasdermin, pore forming domain	Domain
A [auth J], AA [auth W], B [auth X], BA [auth K], C [auth Y], A [auth J], AA [auth W], B [auth X], BA [auth K], C [auth Y], D [auth A], E [auth Z], F [auth B], G [auth C], H [auth L], I [auth a], J [auth E], K [auth F], L [auth O], M [auth G], N [auth Q], O [auth S], P [auth D], Q [auth b], R [auth P], S [auth M], T [auth R], U [auth T], V [auth H], W [auth N], X [auth U], Y [auth V], Z [auth I]	IPR041263	Gasdermin, PUB domain	Domain
A [auth J], AA [auth W], B [auth X], BA [auth K], C [auth Y], A [auth J], AA [auth W], B [auth X], BA [auth K], C [auth Y], D [auth A], E [auth Z], F [auth B], G [auth C], H [auth L], I [auth a], J [auth E], K [auth F], L [auth O], M [auth G], N [auth Q], O [auth S], P [auth D], Q [auth b], R [auth P], S [auth M], T [auth R], U [auth T], V [auth H], W [auth N], X [auth U], Y [auth V], Z [auth I]	IPR042377	Gasdermin-E	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth J], AA [auth W], B [auth X], BA [auth K], C [auth Y], A [auth J], AA [auth W], B [auth X], BA [auth K], C [auth Y], D [auth A], E [auth Z], F [auth B], G [auth C], H [auth L], I [auth a], J [auth E], K [auth F], L [auth O], M [auth G], N [auth Q], O [auth S], P [auth D], Q [auth b], R [auth P], S [auth M], T [auth R], U [auth T], V [auth H], W [auth N], X [auth U], Y [auth V], Z [auth I]	: O60443	autosomal dominant nonsyndromic deafness 5 nonsyndromic genetic deafness rheumatoid arthritis hearing loss disorder astrocytic tumor endogenous depression large cell medulloblastoma osteosarcoma pituitary cancer tuberculosis glioblastoma malignant mesothelioma ovarian cancer psoriasis bipolar disorder autosomal dominant nonsyndromic deafness 5 nonsyndromic genetic deafness rheumatoid arthritis hearing loss disorder astrocytic tumor endogenous depression large cell medulloblastoma osteosarcoma pituitary cancer tuberculosis glioblastoma malignant mesothelioma ovarian cancer psoriasis bipolar disorder pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.