9V9U | pdb_00009v9u

Cryo-EM structure of the ncPRC1.4 complex containing two RNF2-BMI1 bound to the H2AK119ubH2BK120ub-modified nucleosome


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, F
Histone H4
C, G
Histone H2A
L [auth N],
O [auth L]
E3 ubiquitin-protein ligase RING2
M [auth O],
P
Ubiquitin
K [auth M],
N [auth K]
Polycomb complex protein BMI-1
DNA (132-MER)---
DNA (132-MER)---
D, H
Histone H2B -
A, E
Histone H3 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B, F
IPR009072Histone-foldHomologous Superfamily
B, F
IPR001951Histone H4Family
B, F
IPR035425CENP-T/Histone H4, histone foldDomain
B, F
IPR019809Histone H4, conserved siteConserved Site
B, F
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
C, G
IPR009072Histone-foldHomologous Superfamily
C, G
IPR002119Histone H2AFamily
C, G
IPR032454Histone H2A, C-terminal domainDomain
C, G
IPR032458Histone H2A conserved siteConserved Site
C, G
IPR007125Core Histone H2A/H2B/H3 domainDomain
L [auth N],
O [auth L]
IPR043540E3 ubiquitin-protein ligase RING1/RING2Family
L [auth N],
O [auth L]
IPR017907Zinc finger, RING-type, conserved siteConserved Site
L [auth N],
O [auth L]
IPR032443RAWUL domainDomain
L [auth N],
O [auth L]
IPR037937E3 ubiquitin-protein ligase RING2, RAWUL domainDomain
L [auth N],
O [auth L]
IPR013083Zinc finger, RING/FYVE/PHD-typeHomologous Superfamily
L [auth N],
O [auth L]
IPR001841Zinc finger, RING-typeDomain
M [auth O],
P
IPR019954Ubiquitin conserved siteConserved Site
M [auth O],
P
IPR050158Ubiquitin and ubiquitin-likeFamily
M [auth O],
P
IPR000626Ubiquitin-like domainDomain
M [auth O],
P
IPR019956Ubiquitin domainDomain
M [auth O],
P
IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
K [auth M],
N [auth K]
IPR017907Zinc finger, RING-type, conserved siteConserved Site
K [auth M],
N [auth K]
IPR032443RAWUL domainDomain
K [auth M],
N [auth K]
IPR013083Zinc finger, RING/FYVE/PHD-typeHomologous Superfamily
K [auth M],
N [auth K]
IPR001841Zinc finger, RING-typeDomain
D, H
IPR009072Histone-foldHomologous Superfamily
D, H
IPR055333Histone H2B, conserved siteConserved Site
D, H
IPR000558Histone H2BFamily
D, H
IPR007125Core Histone H2A/H2B/H3 domainDomain
A, E
IPR009072Histone-foldHomologous Superfamily
A, E
IPR000164Histone H3/CENP-AFamily
A, E
IPR007125Core Histone H2A/H2B/H3 domainDomain