9V99 | pdb_00009v99

Crystal structure of the periplasmic domain of CadF from Campylobacter jejuni in complex with a peptidoglycan peptide

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALRR_1, LRR_6, LRR_8e9v99A1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: LRR_1, LRR_6, LRR_8ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth I]API-DAL-DAL---
A, B
Outer membrane beta-barrel domain-containing protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR006664Outer membrane protein, bacterialDomain
A, B
IPR006665OmpA-like domainDomain
A, B
IPR011250Outer membrane protein/outer membrane enzyme PagP-like, beta-barrel superfamilyHomologous Superfamily
A, B
IPR030820Outer membrane beta-barrel protein, proteobacteriaDomain
A, B
IPR006690Outer membrane protein, OmpA-like, conserved siteConserved Site
A, B
IPR050330Bacterial Outer Membrane Structural/FunctionalFamily
A, B
IPR027385Outer membrane protein, beta-barrel domainDomain
A, B
IPR036737OmpA-like domain superfamilyHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
C [auth I]API Parent Component: LYS

C [auth I]DAL :  AA0111 , AA0191

:  meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862