9V7K | pdb_00009v7k

Phycobilisome allophycocyanin hexamer C from Gloeobacter violaceus PCC 7421

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
N [auth L]	SCOP2B Superfamily	Globin-like	8064854	3000554	SCOP2B (2022-06-29)
L [auth J]	SCOP2B Superfamily	Globin-like	8064854	3000554	SCOP2B (2022-06-29)
J [auth H]	SCOP2B Superfamily	Globin-like	8064854	3000554	SCOP2B (2022-06-29)
H [auth F]	SCOP2B Superfamily	Globin-like	8064854	3000554	SCOP2B (2022-06-29)
F [auth D]	SCOP2B Superfamily	Globin-like	8064854	3000554	SCOP2B (2022-06-29)
D [auth B]	SCOP2B Superfamily	Globin-like	8064854	3000554	SCOP2B (2022-06-29)
M [auth K]	SCOP2B Superfamily	Globin-like	8064866	3000554	SCOP2B (2022-06-29)
K [auth I]	SCOP2B Superfamily	Globin-like	8064866	3000554	SCOP2B (2022-06-29)
I [auth G]	SCOP2B Superfamily	Globin-like	8064866	3000554	SCOP2B (2022-06-29)
G [auth E]	SCOP2B Superfamily	Globin-like	8064866	3000554	SCOP2B (2022-06-29)
E [auth C]	SCOP2B Superfamily	Globin-like	8064866	3000554	SCOP2B (2022-06-29)
C [auth A]	SCOP2B Superfamily	Globin-like	8064866	3000554	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
O [auth M]	PF01383	CpcD/allophycocyanin linker domain (CpcD)	CpcD/allophycocyanin linker domain		Domain
D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], N [auth L]	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein		Domain
C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], M [auth K]	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein		Domain
A [auth 1]	PF00427	Phycobilisome Linker polypeptide (PBS_linker_poly)	Phycobilisome Linker polypeptide	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
P [auth X]	Glr2806 protein	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
O [auth M]	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], N [auth L]	Allophycocyanin beta subunit	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], M [auth K]	Allophycocyanin alpha subunit	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
B [auth Z]	Glr1262 protein	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
A [auth 1]	Phycobiliprotein ApcE	lyase activity catalytic activity	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
P [auth X]	IPR001297	Phycobilisome linker domain	Domain
P [auth X]	IPR038255	Phycobilisome linker domain superfamily	Homologous Superfamily
O [auth M]	IPR011064	Allophycocyanin linker chain	Homologous Superfamily
O [auth M]	IPR011134	Allophycocyanin linker protein	Family
O [auth M]	IPR008213	CpcD-like domain	Domain
D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], N [auth L]	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], N [auth L]	IPR006245	Allophycocyanin, beta subunit	Family
D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], N [auth L]	IPR009050	Globin-like superfamily	Homologous Superfamily
D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], N [auth L]	IPR012128	Phycobilisome, alpha/beta subunit	Family
C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], M [auth K]	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], M [auth K]	IPR009050	Globin-like superfamily	Homologous Superfamily
C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], M [auth K]	IPR012128	Phycobilisome, alpha/beta subunit	Family
B [auth Z]	IPR001297	Phycobilisome linker domain	Domain
B [auth Z]	IPR038255	Phycobilisome linker domain superfamily	Homologous Superfamily
A [auth 1]	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
A [auth 1]	IPR001297	Phycobilisome linker domain	Domain
A [auth 1]	IPR009050	Globin-like superfamily	Homologous Superfamily
A [auth 1]	IPR038255	Phycobilisome linker domain superfamily	Homologous Superfamily
A [auth 1]	IPR012128	Phycobilisome, alpha/beta subunit	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], N [auth L]	MEN	Parent Component: ASN RESID: AA0070 PSI-MOD : N4-methyl-L-asparagine MOD:00079

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.