Annotations: 9V4P

Cryo-EM structure of A. thaliana MET1(610-1534) bound covalently to a hemi-mCpG DNA

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth A]	CLP_protease	e9v4pA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: CLP_protease	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth A]	PF01426	BAH domain (BAH)	BAH domain	This domain has been called BAH (Bromo adjacent homology) domain and has also been called ELM1 and BAM (Bromo adjacent motif) domain. The function of this domain is unknown but may be involved in protein-protein interaction [3].	Domain
C [auth A]	PF00145	C-5 cytosine-specific DNA methylase (DNA_methylase)	C-5 cytosine-specific DNA methylase		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth A]	DNA (cytosine-5)-methyltransferase 1	DNA binding binding nucleic acid binding transferase activity, transferring one-carbon groups transferase activity methyltransferase activity catalytic activity DNA (cytosine-5-)-methyltransferase activity DNA-methyltransferase activity catalytic activity, acting on DNA catalytic activity, acting on a nucleic acid S-adenosylmethionine-dependent methyltransferase activity chromatin binding	DNA-mediated transformation horizontal gene transfer cellular process regulation of biosynthetic process epigenetic programming of gene expression regulation of biological process regulation of cellular process epigenetic programming in the endosperm epigenetic programming in the zygotic pronuclei epigenetic regulation of gene expression biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process DNA-mediated transformation horizontal gene transfer cellular process regulation of biosynthetic process epigenetic programming of gene expression regulation of biological process regulation of cellular process epigenetic programming in the endosperm epigenetic programming in the zygotic pronuclei epigenetic regulation of gene expression biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process cellular component organization regulation of gene expression biosynthetic process chromatin organization chromatin remodeling regulation of macromolecule biosynthetic process metabolic process cellular component organization or biogenesis macromolecule metabolic process regulation of metabolic process negative regulation of biological process negative regulation of gene expression via chromosomal CpG island methylation negative regulation of cellular process negative regulation of macromolecule metabolic process negative regulation of metabolic process negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of gene expression, epigenetic multicellular organismal process cytoskeleton-dependent cytokinesis reproductive process mitotic cytokinesis developmental process involved in reproduction mitotic cell cycle multicellular organism development fruit development embryo development ending in seed dormancy seed development anatomical structure development reproductive structure development post-embryonic development cell cycle system development cell cycle process developmental process reproductive system development zygote asymmetric cell division plant gross anatomical part developmental process cytokinesis asymmetric cell division mitotic cell cycle process zygote asymmetric cytokinesis in embryo sac cell division reproductive shoot system development shoot system development inflorescence development regulation of developmental process regulation of reproductive process negative regulation of post-embryonic development negative regulation of flower development regulation of multicellular organismal process regulation of flower development regulation of multicellular organismal development negative regulation of developmental process regulation of shoot system development flower development regulation of post-embryonic development negative regulation of reproductive process negative regulation of multicellular organismal process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle
B [auth C]	DNA (5'-D(GPAPTPTPGPGPAPTP(C49)PGPTPAPTPGPTPCPAPTPTPA)-3')	-	-	-
A [auth B]	DNA (5'-D(TPAPATPGPAPCPAPTPAP(5CM)PGPAPTPCPCPAPAPTPC)-3')	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth A]	IPR031303	DNA methylase, C-5 cytosine-specific, conserved site	Conserved Site
C [auth A]	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
C [auth A]	IPR043151	Bromo adjacent homology (BAH) domain superfamily	Homologous Superfamily
C [auth A]	IPR050390	DNA Cytosine-5 Methyltransferase	Family
C [auth A]	IPR001025	Bromo adjacent homology (BAH) domain	Domain
C [auth A]	IPR018117	DNA methylase, C-5 cytosine-specific, active site	Active Site
C [auth A]	IPR001525	C-5 cytosine methyltransferase	Family
C [auth A]	IPR022702	DNA (cytosine-5)-methyltransferase 1, replication foci domain	Domain