9U4M | pdb_00009u4m

Focused refinement of 19S in the substrate-engaged human 26S proteasome bound to midnolin with RPT6 at top of spiral staircase


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth a]26S proteasome non-ATPase regulatory subunit 13
E [auth c]26S proteasome non-ATPase regulatory subunit 14
F [auth Z]26S proteasome non-ATPase regulatory subunit 7
H [auth U]26S proteasome non-ATPase regulatory subunit 1
I [auth W]26S proteasome non-ATPase regulatory subunit 12-
M [auth E]Proteasome 26S subunit, ATPase 6 -
O [auth X]26S proteasome non-ATPase regulatory subunit 11
Q [auth d]26S proteasome non-ATPase regulatory subunit 8-
G [auth e]26S proteasome complex subunit SEM1
D [auth B]26S proteasome regulatory subunit 4
C [auth v]substrate peptide---
R [auth b]26S proteasome non-ATPase regulatory subunit 4
P [auth V]26S proteasome non-ATPase regulatory subunit 3
N [auth F]26S proteasome regulatory subunit 6A
L [auth D]26S proteasome regulatory subunit 6B
K [auth C]26S proteasome regulatory subunit 8
J [auth A]26S proteasome regulatory subunit 7
A [auth Y]26S proteasome non-ATPase regulatory subunit 6-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth a]IPR054179PSD13, N-terminalDomain
B [auth a]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
B [auth a]IPR03529826S Proteasome non-ATPase regulatory subunit 13Family
B [auth a]IPR000717Proteasome component (PCI) domainDomain
E [auth c]IPR05626326S proteasome regulatory subunit RPN11, C-terminal domainDomain
E [auth c]IPR050242JAMM/MPN+ metalloenzymes, peptidase M67AFamily
E [auth c]IPR037518MPN domainDomain
E [auth c]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
F [auth Z]IPR03385826S Proteasome non-ATPase regulatory subunit 7/8Family
F [auth Z]IPR024969EIF3F/CSN6-like, C-terminalDomain
F [auth Z]IPR037518MPN domainDomain
F [auth Z]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
H [auth U]IPR04062326S proteasome regulatory subunit RPN2, C-terminalDomain
H [auth U]IPR016024Armadillo-type foldHomologous Superfamily
H [auth U]IPR002015Proteasome/cyclosome repeatRepeat
H [auth U]IPR011989Armadillo-like helicalHomologous Superfamily
H [auth U]IPR04857026S proteasome non-ATPase regulatory subunit 1/RPN2, N-terminal domainDomain
H [auth U]IPR01664226S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunitFamily
I [auth W]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
I [auth W]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
I [auth W]IPR000717Proteasome component (PCI) domainDomain
I [auth W]IPR04089626S proteasome regulatory subunit RPN5, C-terminal domainDomain
I [auth W]IPR04013426S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4Family
I [auth W]IPR054559PSMD12/CSN4-like, N-terminalDomain
M [auth E]IPR05022126S Proteasome Regulatory ATPaseFamily
M [auth E]IPR041569AAA ATPase, AAA+ lid domainDomain
M [auth E]IPR032501Proteasomal ATPase, second OB domainDomain
M [auth E]IPR003960ATPase, AAA-type, conserved siteConserved Site
M [auth E]IPR003593AAA+ ATPase domainDomain
M [auth E]IPR003959ATPase, AAA-type, coreDomain
M [auth E]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
M [auth E]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
O [auth X]IPR05087126S Proteasome and COP9 Signalosome ComponentsFamily
O [auth X]IPR0407806S proteasome subunit Rpn6, C-terminal helix domainDomain
O [auth X]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
O [auth X]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
O [auth X]IPR04077326S proteasome regulatory subunit Rpn6, N-terminalDomain
O [auth X]IPR000717Proteasome component (PCI) domainDomain
Q [auth d]IPR000717Proteasome component (PCI) domainDomain
Q [auth d]IPR00674626S proteasome non-ATPase regulatory subunit Rpn12Family
Q [auth d]IPR033464CSN8/PSMD8/EIF3KDomain
G [auth e]IPR007834DSS1/SEM1Family
D [auth B]IPR05022126S Proteasome Regulatory ATPaseFamily
D [auth B]IPR041569AAA ATPase, AAA+ lid domainDomain
D [auth B]IPR032501Proteasomal ATPase, second OB domainDomain
D [auth B]IPR003960ATPase, AAA-type, conserved siteConserved Site
D [auth B]IPR003593AAA+ ATPase domainDomain
D [auth B]IPR003959ATPase, AAA-type, coreDomain
D [auth B]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth B]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
R [auth b]IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
R [auth b]IPR02704026S proteasome non-ATPase regulatory subunit 4Family
R [auth b]IPR002035von Willebrand factor, type ADomain
R [auth b]IPR003903Ubiquitin interacting motifConserved Site
R [auth b]IPR049590PSMD4, RAZUL domainDomain
P [auth V]IPR01358626S proteasome non-ATPase regulatory subunit 3, C-terminalDomain
P [auth V]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
P [auth V]IPR050756COP9 signalosome complex subunit 3Family
P [auth V]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
P [auth V]IPR000717Proteasome component (PCI) domainDomain
P [auth V]IPR05798526S proteasome non-ATPase regulatory subunit 3, N-terminal TPR repeatsDomain
N [auth F]IPR05022126S Proteasome Regulatory ATPaseFamily
N [auth F]IPR003593AAA+ ATPase domainDomain
N [auth F]IPR003959ATPase, AAA-type, coreDomain
N [auth F]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
N [auth F]IPR041569AAA ATPase, AAA+ lid domainDomain
N [auth F]IPR032501Proteasomal ATPase, second OB domainDomain
N [auth F]IPR003960ATPase, AAA-type, conserved siteConserved Site
N [auth F]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
L [auth D]IPR05022126S Proteasome Regulatory ATPaseFamily
L [auth D]IPR041569AAA ATPase, AAA+ lid domainDomain
L [auth D]IPR032501Proteasomal ATPase, second OB domainDomain
L [auth D]IPR003960ATPase, AAA-type, conserved siteConserved Site
L [auth D]IPR003593AAA+ ATPase domainDomain
L [auth D]IPR003959ATPase, AAA-type, coreDomain
L [auth D]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
L [auth D]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
K [auth C]IPR05022126S Proteasome Regulatory ATPaseFamily
K [auth C]IPR003593AAA+ ATPase domainDomain
K [auth C]IPR003959ATPase, AAA-type, coreDomain
K [auth C]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
K [auth C]IPR041569AAA ATPase, AAA+ lid domainDomain
K [auth C]IPR032501Proteasomal ATPase, second OB domainDomain
K [auth C]IPR003960ATPase, AAA-type, conserved siteConserved Site
K [auth C]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
J [auth A]IPR05022126S Proteasome Regulatory ATPaseFamily
J [auth A]IPR003593AAA+ ATPase domainDomain
J [auth A]IPR003959ATPase, AAA-type, coreDomain
J [auth A]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
J [auth A]IPR04872326S proteasome regulatory subunit 7-like, OB domainDomain
J [auth A]IPR041569AAA ATPase, AAA+ lid domainDomain
J [auth A]IPR003960ATPase, AAA-type, conserved siteConserved Site
J [auth A]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
A [auth Y]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
A [auth Y]IPR01958526S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1Family
A [auth Y]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
A [auth Y]IPR04954926S proteasome regulatory subunit RPN7/PSMD6, C-terminal helixDomain
A [auth Y]IPR000717Proteasome component (PCI) domainDomain
A [auth Y]IPR04513526S proteasome regulatory subunit Rpn7, N-terminalDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth a]PharosQ9UNM6
E [auth c]PharosO00487
F [auth Z]PharosP51665
H [auth U]PharosQ99460
I [auth W]PharosO00232
O [auth X]PharosO00231
Q [auth d]PharosP48556
G [auth e]PharosP60896
R [auth b]PharosP55036
P [auth V]PharosO43242
N [auth F]PharosP17980
L [auth D]PharosP43686
K [auth C]PharosP62195
J [auth A]PharosP35998
A [auth Y]PharosQ15008