9TI4 | pdb_00009ti4

High resolution Cryo-EM structure of human complex I in mitochondria


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C]NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
B [auth D]NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial
C [auth E]NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
D [auth F]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
F [auth H],
U [auth X]
Acyl carrier protein, mitochondrial
H [auth J]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial
I [auth K]NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial
J [auth L]NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
K [auth M]NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
L [auth N]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
M [auth O]NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial
N [auth P]NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial
O [auth Q]NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial
Q [auth T]NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
R [auth U]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3
S [auth V]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11-
V [auth Y]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial
W [auth Z]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3
X [auth a]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial
Y [auth b]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6
Z [auth c]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
AA [auth d]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
BA [auth e]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial-
CA [auth f]NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial
DA [auth g]NADH dehydrogenase [ubiquinone] 1 subunit C2
EA [auth h]NADH dehydrogenase [ubiquinone] iron-sulfur protein 5
FA [auth i]NADH-ubiquinone oxidoreductase chain 2
GA [auth j]NADH-ubiquinone oxidoreductase chain 3
HA [auth k]NADH-ubiquinone oxidoreductase chain 4L
KA [auth n]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1
LA [auth o]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4
MA [auth p]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
NA [auth r]NADH-ubiquinone oxidoreductase chain 4
OA [auth s]NADH-ubiquinone oxidoreductase chain 1
PA [auth u]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
QA [auth v]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
SA [auth t]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7
G [auth I]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
E [auth G]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
RA [auth w]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial
JA [auth m]NADH-ubiquinone oxidoreductase chain 6
IA [auth l]NADH-ubiquinone oxidoreductase chain 5
T [auth W]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
P [auth S]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth C]IPR019575NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domainDomain
A [auth C]IPR054765SLBB domainDomain
A [auth C]IPR011537NADH ubiquinone oxidoreductase, F subunitFamily
A [auth C]IPR001949NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved siteConserved Site
A [auth C]IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilyHomologous Superfamily
A [auth C]IPR037207NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamilyHomologous Superfamily
A [auth C]IPR011538NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainDomain
A [auth C]IPR050837Complex I 51 kDa subunitFamily
B [auth D]IPR010226NADH-quinone oxidoreductase, chain IFamily
B [auth D]IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
B [auth D]IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
C [auth E]IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitDomain
C [auth E]IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitFamily
D [auth F]IPR016488NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6Family
D [auth F]IPR045299NDUFA6, LYR domainDomain
F [auth H],
U [auth X]
IPR006162Phosphopantetheine attachment sitePTM
F [auth H],
U [auth X]
IPR036736ACP-like superfamilyHomologous Superfamily
F [auth H],
U [auth X]
IPR009081Phosphopantetheine binding ACP domainDomain
F [auth H],
U [auth X]
IPR003231Acyl carrier proteinFamily
H [auth J]IPR051207Mitochondrial Complex I NDUFA9 SubunitFamily
H [auth J]IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
H [auth J]IPR001509NAD-dependent epimerase/dehydrataseDomain
I [auth K]IPR026193NADH-ubiquinone oxidoreductase flavoprotein 3Family
J [auth L]IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4 mitochondrial-likeFamily
J [auth L]IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyHomologous Superfamily
K [auth M]IPR006963Molybdopterin oxidoreductase, 4Fe-4S domainDomain
K [auth M]IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
K [auth M]IPR054351NADH-ubiquinone oxidoreductase, ferredoxin-like domainDomain
K [auth M]IPR010228NADH:ubiquinone oxidoreductase, subunit GFamily
K [auth M]IPR050123Prokaryotic molybdopterin-containing oxidoreductaseFamily
K [auth M]IPR015405NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-likeDomain
K [auth M]IPR006656Molybdopterin oxidoreductaseDomain
K [auth M]IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
K [auth M]IPR000283NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved siteConserved Site
K [auth M]IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingDomain
L [auth N]IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12Family
M [auth O]IPR041921NADH-quinone oxidoreductase subunit E, N-terminalHomologous Superfamily
M [auth O]IPR042128NuoE domainDomain
M [auth O]IPR002023NADH-quinone oxidoreductase subunit E-likeFamily
M [auth O]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
N [auth P]IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyHomologous Superfamily
N [auth P]IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitDomain
N [auth P]IPR020396NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved siteConserved Site
N [auth P]IPR010218NADH dehydrogenase, subunit CFamily
O [auth Q]IPR022885NAD(P)H-quinone oxidoreductase subunit D/HFamily
O [auth Q]IPR001135NADH-quinone oxidoreductase, subunit DDomain
O [auth Q]IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved siteConserved Site
O [auth Q]IPR029014[NiFe]-hydrogenase, large subunitHomologous Superfamily
Q [auth T]IPR016668NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrialFamily
Q [auth T]IPR019401Zinc finger, CHCC-typeDomain
R [auth U]IPR026626NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3Family
S [auth V]IPR039205NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11Family
V [auth Y]IPR026627NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, animal typeFamily
W [auth Z]IPR012576NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3Family
X [auth a]IPR019173NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunitFamily
Y [auth b]IPR019174NADH dehydrogenase 1, beta subcomplex, subunit 6Family
Z [auth c]IPR008699NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8Family
Z [auth c]IPR016551NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, metazoaFamily
AA [auth d]IPR019377NADH-ubiquinone oxidoreductase, subunit 10Family
AA [auth d]IPR039993NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10Family
BA [auth e]IPR019329NADH:ubiquinone oxidoreductase, ESSS subunitFamily
CA [auth f]IPR026192NADH-ubiquinone oxidoreductase 1 subunit C1Family
DA [auth g]IPR009423NADH dehydrogenase [ubiquinone] 1 subunit C2, NDUC2Family
EA [auth h]IPR019342NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5Family
FA [auth i]IPR010933NADH dehydrogenase subunit 2, C-terminalDomain
FA [auth i]IPR003917NADH:ubiquinone oxidoreductase, chain 2Family
FA [auth i]IPR050175Complex I Subunit 2Family
FA [auth i]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
GA [auth j]IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
GA [auth j]IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily
HA [auth k]IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
HA [auth k]IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily
KA [auth n]IPR012575NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, NDUB1Family
LA [auth o]IPR009866NADH:ubiquinone oxidoreductase, subunit NDUFB4Family
MA [auth p]IPR033034NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9Family
MA [auth p]IPR008011Complex 1 LYR protein domainDomain
MA [auth p]IPR045292NDUFB9, LYR domainDomain
NA [auth r]IPR003918NADH:ubiquinone oxidoreductaseFamily
NA [auth r]IPR010227NADH-quinone oxidoreductase, chain M/4Family
NA [auth r]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
NA [auth r]IPR000260NADH:ubiquinone oxidoreductase chain 4, N-terminalDomain
OA [auth s]IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site
OA [auth s]IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
PA [auth u]IPR010625CHCHDomain
PA [auth u]IPR016680NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8Family
QA [auth v]IPR008698NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7Family
SA [auth t]IPR009947NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7Family
G [auth I]IPR006806NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5Family
E [auth G]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
E [auth G]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
E [auth G]IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2Family
RA [auth w]IPR050566Deoxyribonucleoside KinaseFamily
RA [auth w]IPR031314Deoxynucleoside kinase domainDomain
RA [auth w]IPR015828NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrialFamily
RA [auth w]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
JA [auth m]IPR050269Complex I Subunit 6Family
JA [auth m]IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
IA [auth l]IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
IA [auth l]IPR010934NADH dehydrogenase subunit 5, C-terminalDomain
IA [auth l]IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
IA [auth l]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
IA [auth l]IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
T [auth W]IPR009346GRIM-19Family
P [auth S]IPR017384NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1Family

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth C]PharosP49821
B [auth D]PharosO00217
C [auth E]PharosO75251
D [auth F]PharosP56556
F [auth H],
U [auth X]
PharosO14561
H [auth J]PharosQ16795
I [auth K]PharosP56181
J [auth L]PharosO43181
K [auth M]PharosP28331
L [auth N]PharosQ9UI09
M [auth O]PharosP19404
N [auth P]PharosO75489
O [auth Q]PharosO75306
Q [auth T]PharosO75380
R [auth U]PharosO95167
S [auth V]PharosQ86Y39
V [auth Y]PharosO95178
W [auth Z]PharosO43676
X [auth a]PharosO43674
Y [auth b]PharosO95139
Z [auth c]PharosO95169
AA [auth d]PharosO96000
BA [auth e]PharosQ9NX14
CA [auth f]PharosO43677
DA [auth g]PharosO95298
EA [auth h]PharosO43920
FA [auth i]PharosP03891
GA [auth j]PharosP03897
HA [auth k]PharosP03901
KA [auth n]PharosO75438
LA [auth o]PharosO95168
MA [auth p]PharosQ9Y6M9
NA [auth r]PharosP03905
OA [auth s]PharosP03886
PA [auth u]PharosP51970
QA [auth v]PharosP17568
SA [auth t]PharosO95182
G [auth I]PharosQ16718
E [auth G]PharosO43678
RA [auth w]PharosO95299
JA [auth m]PharosP03923
IA [auth l]PharosP03915
T [auth W]PharosQ9P0J0
P [auth S]PharosO15239

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
C [auth E]SEP Parent Component: SER

RESIDAA0037

PSI-MOD :  O-phospho-L-serine MOD:00046
O [auth Q]NMM Parent Component: ARG

RESIDAA0037