Annotations: 9THK

Structure of human CLN8 in an apo-state

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], B [auth D]	PF03798	TLC domain (TRAM_LAG1_CLN8)	TLC domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth D]	Protein CLN8	ceramide binding binding sphingolipid binding lipid binding	phospholipid metabolic process organophosphate metabolic process metabolic process cellular process primary metabolic process phosphorus metabolic process lipid metabolic process developmental process multicellular organism development multicellular organismal process anatomical structure development nervous system development animal gross anatomical part developmental process system development phospholipid metabolic process organophosphate metabolic process metabolic process cellular process primary metabolic process phosphorus metabolic process lipid metabolic process developmental process multicellular organism development multicellular organismal process anatomical structure development nervous system development animal gross anatomical part developmental process system development biosynthetic process lipid biosynthetic process ceramide metabolic process sphingolipid biosynthetic process ceramide biosynthetic process sphingolipid metabolic process localization transport macromolecule localization lipid localization lipid transport establishment of localization chemical homeostasis homeostatic process lipid homeostasis catabolic process protein catabolic process protein metabolic process macromolecule metabolic process macromolecule catabolic process regulation of biological process negative regulation of proteolysis regulation of cellular process regulation of protein metabolic process negative regulation of metabolic process biological regulation negative regulation of biological process regulation of macromolecule metabolic process regulation of primary metabolic process regulation of proteolysis proteolysis negative regulation of cellular process regulation of metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process secondary alcohol metabolic process sterol metabolic process steroid metabolic process cholesterol metabolic process alcohol metabolic process small molecule metabolic process	cellular anatomical structure membrane membrane-bounded organelle intracellular anatomical structure intracellular membrane-bounded organelle intracellular organelle bounding membrane of organelle organelle endoplasmic reticulum-Golgi intermediate compartment membrane endoplasmic reticulum-Golgi intermediate compartment cytoplasm organelle membrane endoplasmic reticulum endomembrane system cellular anatomical structure membrane membrane-bounded organelle intracellular anatomical structure intracellular membrane-bounded organelle intracellular organelle bounding membrane of organelle organelle endoplasmic reticulum-Golgi intermediate compartment membrane endoplasmic reticulum-Golgi intermediate compartment cytoplasm organelle membrane endoplasmic reticulum endomembrane system organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth D]	IPR050846	TLC domain-containing	Family
A [auth B], B [auth D]	IPR006634	TRAM/LAG1/CLN8 homology domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth B], B [auth D]	: Q9UBY8	neuronal ceroid lipofuscinosis 8 neuronal ceroid lipofuscinosis intellectual disability psoriasis ulcerative colitis CEROID LIPOFUSCINOSIS, NEURONAL, 8 lung cancer medulloblastoma osteosarcoma sinusitis cystic fibrosis invasive ductal breast carcinoma lysosomal storage disease neurodegenerative disease neuronal ceroid lipofuscinosis 8 northern epilepsy variant neuronal ceroid lipofuscinosis 8 neuronal ceroid lipofuscinosis intellectual disability psoriasis ulcerative colitis CEROID LIPOFUSCINOSIS, NEURONAL, 8 lung cancer medulloblastoma osteosarcoma sinusitis cystic fibrosis invasive ductal breast carcinoma lysosomal storage disease neurodegenerative disease neuronal ceroid lipofuscinosis 8 northern epilepsy variant Pick disease tuberculosis epilepsy inborn errors of metabolism large cell medulloblastoma malignant mesothelioma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9THK | pdb_00009thk

Structure of human CLN8 in an apo-state

External Resource: Annotation

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation