9TA5 | pdb_00009ta5

PITP covalently bound to microcolin H

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Bet v1-like	8035201	3000738	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF02121	Phosphatidylinositol transfer protein (IP_trans)	Phosphatidylinositol transfer protein	Along with the structurally unrelated Sec14p family (found in Pfam:PF00650), this family can bind/exchange one molecule of phosphatidylinositol (PI) or phosphatidylcholine (PC) and thus aids their transfer between different membrane compartments. The ...	Along with the structurally unrelated Sec14p family (found in Pfam:PF00650), this family can bind/exchange one molecule of phosphatidylinositol (PI) or phosphatidylcholine (PC) and thus aids their transfer between different membrane compartments. There are three sub-families - all share an N-terminal PITP-like domain, whose sequence is highly conserved. It is described as consisting of three regions. The N-terminal region is thought to bind the lipid and contains two helices and an eight-stranded, mostly antiparallel beta-sheet. An intervening loop region, which is thought to play a role in protein-protein interactions, separates this from the C-terminal region, which exhibits the greatest sequence variation and may be involved in membrane binding. PITP alpha (Swiss:Q00169) has a 16-fold greater affinity for PI than PC. Together with PITP beta (Swiss:P48739), it is expressed ubiquitously in all tissues [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Microcolin H	-	-	-
A	Phosphatidylinositol transfer protein alpha isoform	phosphatidylcholine transporter activity lipid transporter activity transporter activity phospholipid transporter activity binding phospholipid binding lipid binding phosphatidylinositol binding phospholipid transfer activity phosphatidylcholine transfer activity lipid transfer activity cation binding ion binding phosphatidylcholine binding phosphatidylcholine transporter activity lipid transporter activity transporter activity phospholipid transporter activity binding phospholipid binding lipid binding phosphatidylinositol binding phospholipid transfer activity phosphatidylcholine transfer activity lipid transfer activity cation binding ion binding phosphatidylcholine binding quaternary ammonium group binding small molecule binding anion binding phosphatidylglycerol binding phosphatidylinositol transfer activity	multicellular organismal process sensory perception of light stimulus system process sensory perception nervous system process visual perception localization transport macromolecule localization phospholipid transport lipid localization lipid transport establishment of localization organophosphate ester transport multicellular organismal process sensory perception of light stimulus system process sensory perception nervous system process visual perception localization transport macromolecule localization phospholipid transport lipid localization lipid transport establishment of localization organophosphate ester transport primary metabolic process metabolic process cellular process lipid metabolic process axonogenesis cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis cellular component organization neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation anatomical structure development cellular component organization or biogenesis system development developmental process plasma membrane bounded cell projection organization nervous system development axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron development	extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol intracellular organelle extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol intracellular organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001666	Phosphatidylinositol transfer protein	Family
A	IPR023393	START-like domain superfamily	Homologous Superfamily
A	IPR055261	Phosphatidylinositol transfer protein, N-terminal	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q00169	atypical teratoid rhabdoid tumor large cell medulloblastoma psoriasis brain aneurysm malignant glioma tuberculosis glioblastoma ovarian cancer

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
B	A1IG7
B	C9T
B	HZP	Parent Component: PRO
B	MLE	Parent Component: LEU RESID: AA0337 PSI-MOD : N-methyl-L-leucine MOD:00342
B	MVA	Parent Component: VAL RESID: AA0337
B	TH5	Parent Component: THR RESID: AA0337 , AA0423 PSI-MOD : N-methyl-L-leucine MOD:00342 , O-acetyl-L-threonine MOD:01171

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.