9T6M | pdb_00009t6m

E. coli 70S ribosome from delta-10 strain


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Small ribosomal subunit protein uS9
Small ribosomal subunit protein uS8
Small ribosomal subunit protein uS7
Small ribosomal subunit protein bS6, fully modified isoform
CB [auth 4]Large ribosomal subunit protein bL31A
BB [auth 3]Large ribosomal subunit protein bL36A
AB [auth 2]Large ribosomal subunit protein bL35
ZA [auth 1]Large ribosomal subunit protein bL34
YA [auth 0]Large ribosomal subunit protein bL33
XA [auth z]Large ribosomal subunit protein bL32
Small ribosomal subunit protein uS5
WA [auth y]Large ribosomal subunit protein uL30
VA [auth x]Large ribosomal subunit protein uL29
UA [auth w]Large ribosomal subunit protein bL28
TA [auth v]Large ribosomal subunit protein bL27
SA [auth u]Large ribosomal subunit protein bL25
RA [auth t]Large ribosomal subunit protein uL24
QA [auth s]Large ribosomal subunit protein uL23
PA [auth r]Large ribosomal subunit protein uL22
OA [auth q]Large ribosomal subunit protein bL21
NA [auth p]Large ribosomal subunit protein bL20
Small ribosomal subunit protein uS4
MA [auth o]Large ribosomal subunit protein bL19
LA [auth n]Large ribosomal subunit protein uL18
KA [auth m]Large ribosomal subunit protein bL17
JA [auth l]Large ribosomal subunit protein uL16
IA [auth k]Large ribosomal subunit protein uL15
HA [auth j]Large ribosomal subunit protein uL14
GA [auth i]Large ribosomal subunit protein uL13
FA [auth h]Large ribosomal subunit protein bL9
EA [auth g]Large ribosomal subunit protein uL6
DA [auth f]Large ribosomal subunit protein uL5
Small ribosomal subunit protein uS3
CA [auth e]Large ribosomal subunit protein uL4
BA [auth d]Large ribosomal subunit protein uL3
AA [auth c]Large ribosomal subunit protein uL2
Z [auth b]5S rRNA---
Y [auth a]23S rRNA---
DB [auth 5],
X [auth Z]
tRNA(fMet)---
W [auth Y]tRNA(Phe)---
V [auth X]mRNA---
Small ribosomal subunit protein bS21
Small ribosomal subunit protein bS20
Small ribosomal subunit protein uS2
Small ribosomal subunit protein uS19
Small ribosomal subunit protein bS18
Small ribosomal subunit protein uS17
Small ribosomal subunit protein bS16
Small ribosomal subunit protein uS15
Small ribosomal subunit protein uS14
Small ribosomal subunit protein uS13
Small ribosomal subunit protein uS12
Small ribosomal subunit protein uS11
Small ribosomal subunit protein uS10
16S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR000754Small ribosomal subunit protein uS9Family
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IPR000630Small ribosomal subunit protein uS8Family
IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
IPR000235Small ribosomal subunit protein uS7Family
IPR023798Small ribosomal subunit protein uS7 domainDomain
IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
IPR000529Small ribosomal subunit protein bS6Family
IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
CB [auth 4]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
CB [auth 4]IPR027491Large ribosomal subunit protein bL31 type AFamily
CB [auth 4]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
CB [auth 4]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
BB [auth 3]IPR000473Large ribosomal subunit protein bL36Family
BB [auth 3]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
AB [auth 2]IPR021137Large ribosomal subunit protein bL35-likeFamily
AB [auth 2]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
AB [auth 2]IPR001706Large ribosomal subunit protein bL35Family
AB [auth 2]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
ZA [auth 1]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
ZA [auth 1]IPR000271Large ribosomal subunit protein bL34Family
YA [auth 0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
YA [auth 0]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
YA [auth 0]IPR001705Large ribosomal subunit protein bL33Family
YA [auth 0]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
XA [auth z]IPR002677Large ribosomal subunit protein bL32Family
XA [auth z]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XA [auth z]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
IPR000851Small ribosomal subunit protein uS5Family
IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
WA [auth y]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
WA [auth y]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
WA [auth y]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
WA [auth y]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
VA [auth x]IPR050063Universal ribosomal protein uL29Family
VA [auth x]IPR001854Large ribosomal subunit protein uL29Family
VA [auth x]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
VA [auth x]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
UA [auth w]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
UA [auth w]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
UA [auth w]IPR026569Large ribosomal subunit protein bL28Family
UA [auth w]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
TA [auth v]IPR001684Large ribosomal subunit protein bL27Family
TA [auth v]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
SA [auth u]IPR020055Ribosomal protein bL25, short-formFamily
SA [auth u]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
SA [auth u]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
SA [auth u]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
SA [auth u]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
RA [auth t]IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
RA [auth t]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
RA [auth t]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
RA [auth t]IPR003256Large ribosomal subunit protein uL24Family
RA [auth t]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
RA [auth t]IPR005824KOWDomain
RA [auth t]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
QA [auth s]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
QA [auth s]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
QA [auth s]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
QA [auth s]IPR013025Large ribosomal subunit protein uL23-likeFamily
PA [auth r]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
PA [auth r]IPR001063Large ribosomal subunit protein uL22Family
PA [auth r]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
PA [auth r]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
PA [auth r]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
OA [auth q]IPR028909Large ribosomal subunit protein bL21-likeFamily
OA [auth q]IPR001787Large ribosomal subunit protein bL21Family
OA [auth q]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
OA [auth q]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
NA [auth p]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
NA [auth p]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
NA [auth p]IPR005813Large ribosomal subunit protein bL20Family
IPR002942RNA-binding S4 domainDomain
IPR022801Small ribosomal subunit protein uS4Family
IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
MA [auth o]IPR001857Large ribosomal subunit protein bL19Family
MA [auth o]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
MA [auth o]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
MA [auth o]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
LA [auth n]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
LA [auth n]IPR057268Large ribosomal subunit protein uL18Family
LA [auth n]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
KA [auth m]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
KA [auth m]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
KA [auth m]IPR000456Large ribosomal subunit protein bL17Family
JA [auth l]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
JA [auth l]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
JA [auth l]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
JA [auth l]IPR016180Large ribosomal subunit protein uL16 domainDomain
JA [auth l]IPR047873Large ribosomal subunit protein uL16Family
IA [auth k]IPR021131Large ribosomal subunit protein uL15/eL18Domain
IA [auth k]IPR030878Large ribosomal subunit protein uL15Family
IA [auth k]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
IA [auth k]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
IA [auth k]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
HA [auth j]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
HA [auth j]IPR000218Large ribosomal subunit protein uL14Family
HA [auth j]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
HA [auth j]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
GA [auth i]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
GA [auth i]IPR005822Large ribosomal subunit protein uL13Family
GA [auth i]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
GA [auth i]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
FA [auth h]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
FA [auth h]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
FA [auth h]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
FA [auth h]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
FA [auth h]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
FA [auth h]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
FA [auth h]IPR000244Large ribosomal subunit protein bL9Family
EA [auth g]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
EA [auth g]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
EA [auth g]IPR000702Large ribosomal subunit protein uL6-likeFamily
EA [auth g]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
EA [auth g]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
DA [auth f]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
DA [auth f]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
DA [auth f]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
DA [auth f]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
DA [auth f]IPR002132Large ribosomal subunit protein uL5Family
DA [auth f]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
IPR057258Small ribosomal subunit protein uS3Family
IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
IPR004087K Homology domainDomain
IPR004044K Homology domain, type 2Domain
IPR015946K homology domain-like, alpha/betaHomologous Superfamily
IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
CA [auth e]IPR013005Large ribosomal subunit protein uL4-likeFamily
CA [auth e]IPR002136Large ribosomal subunit protein uL4Family
CA [auth e]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
BA [auth d]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
BA [auth d]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
BA [auth d]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
BA [auth d]IPR000597Large ribosomal subunit protein uL3Family
AA [auth c]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
AA [auth c]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
AA [auth c]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth c]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth c]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
AA [auth c]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AA [auth c]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
AA [auth c]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
AA [auth c]IPR002171Large ribosomal subunit protein uL2Family
IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
IPR001911Small ribosomal subunit protein bS21Family
IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
IPR002583Small ribosomal subunit protein bS20Family
IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
IPR001865Small ribosomal subunit protein uS2Family
IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
IPR002222Small ribosomal subunit protein uS19Family
IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
IPR001648Small ribosomal subunit protein bS18Family
IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR000266Small ribosomal subunit protein uS17Family
IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
IPR000307Small ribosomal subunit protein bS16Family
IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
IPR000589Small ribosomal subunit protein uS15Family
IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
IPR001209Small ribosomal subunit protein uS14Family
IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
IPR001892Small ribosomal subunit protein uS13Family
IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
IPR005679Ribosomal protein uS12, bacteriaFamily
IPR006032Small ribosomal subunit protein uS12Family
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR001971Small ribosomal subunit protein uS11Family
IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
IPR027486Small ribosomal subunit protein uS10 domainDomain
IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
IPR001848Small ribosomal subunit protein uS10Family

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
JA [auth l]4D4 Parent Component: ARG

JA [auth l]MS6 Parent Component: MET

BA [auth d]MEQ Parent Component: GLN

RESIDAA0071

PSI-MOD :  N5-methyl-L-glutamine MOD:00080
Y [auth a]1MG Parent Component: G

RESIDAA0071

Y [auth a]2MG Parent Component: G

RESIDAA0071

Y [auth a]3TD Parent Component: U

RESIDAA0071

Y [auth a]5MC Parent Component: C

RESIDAA0071

Y [auth a]5MU Parent Component: U

RESIDAA0071

Y [auth a]6MZ Parent Component: A

RESIDAA0071

Y [auth a]H2U Parent Component: U

RESIDAA0071

Y [auth a]PSU Parent Component: U

RESIDAA0071

DB [auth 5],
X [auth Z]
4SU Parent Component: U

RESIDAA0071

DB [auth 5],
X [auth Z]
5MU Parent Component: U

RESIDAA0071

DB [auth 5],
X [auth Z]
H2U Parent Component: U

RESIDAA0071

DB [auth 5],
X [auth Z]
OMC Parent Component: C

RESIDAA0071

DB [auth 5],
X [auth Z]
PSU Parent Component: U

RESIDAA0071

W [auth Y]3AU Parent Component: U

RESIDAA0071

W [auth Y]4SU Parent Component: U

RESIDAA0071

W [auth Y]5MU Parent Component: U

RESIDAA0071

W [auth Y]G7M Parent Component: G

RESIDAA0071

W [auth Y]H2U Parent Component: U

RESIDAA0071

W [auth Y]MIA Parent Component: A

RESIDAA0071

W [auth Y]PSU Parent Component: U

RESIDAA0071

D2T Parent Component: ASP

RESIDAA0071

IAS RESIDAA0071

2MG Parent Component: G

RESIDAA0071

4OC Parent Component: C

RESIDAA0071

5MC Parent Component: C

RESIDAA0071

G7M Parent Component: G

RESIDAA0071

MA6 Parent Component: A

RESIDAA0071

PSU Parent Component: U

RESIDAA0071

UR3 Parent Component: U

RESIDAA0071