9SIQ | pdb_00009siq

Structure of the honeybee GABAA RDL receptor with Chrodrimanin B

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Complex1_LYR_2	e9siqA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Complex1_LYR_2	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C [auth D], D [auth E], E [auth C]	PF02932	Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)	Neurotransmitter-gated ion-channel transmembrane region	This family includes the four transmembrane helices that form the ion channel.	Domain
A, B, C [auth D], D [auth E], E [auth C]	PF02931	Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)	Neurotransmitter-gated ion-channel ligand binding domain	This family is the extracellular ligand binding domain of these ion channels [1]. This domain forms a pentameric arrangement in the known structure.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C [auth D], D [auth E], E [auth C]	Gamma-aminobutyric acid receptor subunit beta	monoatomic anion transmembrane transporter activity gated channel activity monoatomic ion channel activity ligand-gated monoatomic anion channel activity ligand-gated channel activity ligand-gated monoatomic ion channel activity passive transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity monoatomic anion channel activity transporter activity transmembrane transporter activity chloride transmembrane transporter activity chloride channel activity monoatomic anion transmembrane transporter activity gated channel activity monoatomic ion channel activity ligand-gated monoatomic anion channel activity ligand-gated channel activity ligand-gated monoatomic ion channel activity passive transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity monoatomic anion channel activity transporter activity transmembrane transporter activity chloride transmembrane transporter activity chloride channel activity extracellular ligand-gated monoatomic ion channel activity GABA-A receptor activity GABA receptor activity molecular transducer activity transmembrane signaling receptor activity signaling receptor activity	-	cell periphery postsynapse cellular anatomical structure postsynaptic membrane synapse cell junction membrane plasma membrane plasma membrane region synaptic membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C [auth D], D [auth E], E [auth C]	IPR018000	Neurotransmitter-gated ion-channel, conserved site	Conserved Site
A, B, C [auth D], D [auth E], E [auth C]	IPR038050	Neuronal acetylcholine receptor	Homologous Superfamily
A, B, C [auth D], D [auth E], E [auth C]	IPR006202	Neurotransmitter-gated ion-channel ligand-binding domain	Domain
A, B, C [auth D], D [auth E], E [auth C]	IPR036719	Neurotransmitter-gated ion-channel transmembrane domain superfamily	Homologous Superfamily
A, B, C [auth D], D [auth E], E [auth C]	IPR006028	Gamma-aminobutyric acid A receptor/Glycine receptor alpha	Family
A, B, C [auth D], D [auth E], E [auth C]	IPR002289	Gamma-aminobutyric-acid A receptor, beta subunit	Family
A, B, C [auth D], D [auth E], E [auth C]	IPR006029	Neurotransmitter-gated ion-channel transmembrane domain	Domain
A, B, C [auth D], D [auth E], E [auth C]	IPR036734	Neurotransmitter-gated ion-channel ligand-binding domain superfamily	Homologous Superfamily
A, B, C [auth D], D [auth E], E [auth C]	IPR006201	Neurotransmitter-gated ion-channel	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.