Annotations: 9RMD

Chains	Accession	Name	Description	Comments	Source
A	PF13898	Deubiquitinating enzyme MINDY-3/4, conserved domain (MINDY-3_4_CD)	Deubiquitinating enzyme MINDY-3/4, conserved domain	Deubiquitinating enzymes (DUBs) remove ubiquitin (Ub) from Ub-conjugated substrates to regulate the functional outcome of ubiquitination. This entry includes MINDY-3/4. They belong to the MINDY (motif interacting with Ub-containing novel DUB) family ...	Deubiquitinating enzymes (DUBs) remove ubiquitin (Ub) from Ub-conjugated substrates to regulate the functional outcome of ubiquitination. This entry includes MINDY-3/4. They belong to the MINDY (motif interacting with Ub-containing novel DUB) family (peptidase family C121), whose members are deubiquitinating enzymes releasing Lys48-linked ubiquitin [1]. This is a conserved domain found in deubiquitinating enzymes, MINDY-3 and MINDY-4.	Domain

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Ubiquitin carboxyl-terminal hydrolase MINDY-3	cysteine-type peptidase activity ubiquitin-like protein peptidase activity peptidase activity cysteine-type deubiquitinase activity catalytic activity, acting on a protein hydrolase activity catalytic activity deubiquitinase activity K48-linked deubiquitinase activity	protein deubiquitination primary metabolic process protein modification by small protein removal macromolecule modification metabolic process cellular process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein K48-linked deubiquitination protein modification by small protein conjugation or removal	membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane membrane-enclosed lumen membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen

Chains	Accession	Name	Type
A	IPR025257	Deubiquitinating enzyme MINDY-3/4, conserved domain	Domain
A	IPR039785	Deubiquitinating enzyme MINDY-3/4	Family
A	IPR011992	EF-hand domain pair	Homologous Superfamily