Annotations: 9RK6

Paraplegin N-terminal domain

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], B [auth A]	PF06480	FtsH Extracellular (FtsH_ext)	FtsH Extracellular	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth A]	Mitochondrial inner membrane m-AAA protease component paraplegin	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity metalloendopeptidase activity metallopeptidase activity endopeptidase activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity metalloendopeptidase activity metallopeptidase activity endopeptidase activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity, acting on acid anhydrides ATP-dependent activity cation binding transition metal ion binding zinc ion binding metal ion binding ATP-dependent peptidase activity	primary metabolic process gene expression macromolecule biosynthetic process protein maturation mitochondrial protein processing biosynthetic process proteolysis protein processing metabolic process cellular process protein metabolic process macromolecule metabolic process regulation of calcium ion transport regulation of localization primary metabolic process gene expression macromolecule biosynthetic process protein maturation mitochondrial protein processing biosynthetic process proteolysis protein processing metabolic process cellular process protein metabolic process macromolecule metabolic process regulation of calcium ion transport regulation of localization regulation of cellular process transport monoatomic ion transmembrane transport regulation of monoatomic ion transmembrane transport calcium ion transport metal ion transport monoatomic cation transmembrane transport regulation of calcium ion transmembrane transport localization intercellular transport regulation of calcium import into the mitochondrion monoatomic ion transport calcium import into the mitochondrion monoatomic cation transport regulation of metal ion transport regulation of biological process regulation of transport regulation of monoatomic ion transport biological regulation establishment of localization transmembrane transport regulation of transmembrane transport mitochondrial calcium ion transmembrane transport regulation of monoatomic cation transmembrane transport calcium ion transmembrane transport developmental process multicellular organism development multicellular organismal process anatomical structure development nervous system development animal gross anatomical part developmental process system development regulation of membrane permeability regulation of biological quality regulation of mitochondrial membrane permeability positive regulation of mitochondrial membrane permeability positive regulation of membrane permeability cell death mitochondrial outer membrane permeabilization involved in programmed cell death programmed cell death	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane mitochondrial protein-containing complex protein-containing complex catalytic complex peptidase complex membrane protein complex inner mitochondrial membrane protein complex m-AAA complex mitochondrial permeability transition pore complex pore complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth A]	IPR000642	Peptidase M41	Domain
A [auth B], B [auth A]	IPR011546	Peptidase M41, FtsH extracellular	Domain
A [auth B], B [auth A]	IPR003593	AAA+ ATPase domain	Domain
A [auth B], B [auth A]	IPR003959	ATPase, AAA-type, core	Domain
A [auth B], B [auth A]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A [auth B], B [auth A]	IPR037219	Peptidase M41-like	Homologous Superfamily
A [auth B], B [auth A]	IPR041569	AAA ATPase, AAA+ lid domain	Domain
A [auth B], B [auth A]	IPR050928	ATP-dependent Zinc Metalloprotease	Family
A [auth B], B [auth A]	IPR005936	ATP-dependent zinc metalloprotease, FtsH	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth B], B [auth A]	: Q9UQ90	hereditary spastic paraplegia 7 paraplegia osteogenesis imperfecta hereditary spastic paraplegia neurodegenerative disease pancreatic intraductal papillary-mucinous carcinoma Paraplegia, Ataxic 16q24.3 microdeletion syndrome attention deficit hyperactivity disorder, inattentive type progressive external ophthalmoplegia Charcot-Marie-Tooth disease lateral sclerosis malignant glioma oligodendroglioma osteosarcoma hereditary spastic paraplegia 7 paraplegia osteogenesis imperfecta hereditary spastic paraplegia neurodegenerative disease pancreatic intraductal papillary-mucinous carcinoma Paraplegia, Ataxic 16q24.3 microdeletion syndrome attention deficit hyperactivity disorder, inattentive type progressive external ophthalmoplegia Charcot-Marie-Tooth disease lateral sclerosis malignant glioma oligodendroglioma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia astrocytic tumor Pick disease atypical teratoid rhabdoid tumor skin basal cell carcinoma glioblastoma intellectual disability leukodystrophy medulloblastoma mucopolysaccharidosis type 4 osteochondrodysplasia ovarian cancer primary lateral sclerosis, adult, 1 cancer large cell medulloblastoma malignant ependymoma melanoma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9RK6 | pdb_00009rk6

Paraplegin N-terminal domain

External Resource: Annotation

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation