9RGU | pdb_00009rgu

Crystal Structure of Rattus norvegicus Enoyl-CoA Hydratase in complex with 3S hydroxyhexanoyl-PAN and 3',5', diphosphate adenosine

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
E	SCOP2B Superfamily	ClpP/crotonase	8057686	3000033	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	ClpP/crotonase	8057686	3000033	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	ClpP/crotonase	8057686	3000033	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	ClpP/crotonase	8057686	3000033	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	ClpP/crotonase	8057686	3000033	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	ClpP/crotonase	8057686	3000033	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
E	PF00378	Enoyl-CoA hydratase/isomerase (ECH_1)	Enoyl-CoA hydratase/isomerase	This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase.	Domain
D	PF00378	Enoyl-CoA hydratase/isomerase (ECH_1)	Enoyl-CoA hydratase/isomerase	This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase.	Domain
B, C	PF00378	Enoyl-CoA hydratase/isomerase (ECH_1)	Enoyl-CoA hydratase/isomerase	This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase.	Domain
A, F	PF00378	Enoyl-CoA hydratase/isomerase (ECH_1)	Enoyl-CoA hydratase/isomerase	This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E	Enoyl-CoA hydratase, mitochondrial	isomerase activity intramolecular oxidoreductase activity, transposing C=C bonds intramolecular oxidoreductase activity delta(3)-delta(2)-enoyl-CoA isomerase activity catalytic activity enoyl-CoA hydratase activity (2E)-butenoyl-CoA hydratase activity hydro-lyase activity 3-hydroxyacyl-CoA dehydratase activity lyase activity carbon-oxygen lyase activity 3-hydroxypropionyl-CoA dehydratase activity	catabolic process oxoacid metabolic process L-amino acid catabolic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process branched-chain amino acid catabolic process L-amino acid metabolic process proteinogenic amino acid metabolic process proteinogenic amino acid catabolic process carboxylic acid catabolic process metabolic process cellular process small molecule metabolic process catabolic process oxoacid metabolic process L-amino acid catabolic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process branched-chain amino acid catabolic process L-amino acid metabolic process proteinogenic amino acid metabolic process proteinogenic amino acid catabolic process carboxylic acid catabolic process metabolic process cellular process small molecule metabolic process branched-chain amino acid metabolic process L-valine catabolic process small molecule catabolic process amino acid catabolic process fatty acid metabolic process lipid catabolic process lipid modification fatty acid catabolic process monocarboxylic acid catabolic process fatty acid oxidation fatty acid beta-oxidation monocarboxylic acid metabolic process lipid oxidation lipid metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen organelle lumen
D	Enoyl-CoA hydratase, mitochondrial	isomerase activity intramolecular oxidoreductase activity, transposing C=C bonds intramolecular oxidoreductase activity delta(3)-delta(2)-enoyl-CoA isomerase activity catalytic activity enoyl-CoA hydratase activity (2E)-butenoyl-CoA hydratase activity hydro-lyase activity 3-hydroxyacyl-CoA dehydratase activity lyase activity carbon-oxygen lyase activity 3-hydroxypropionyl-CoA dehydratase activity	catabolic process oxoacid metabolic process L-amino acid catabolic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process branched-chain amino acid catabolic process L-amino acid metabolic process proteinogenic amino acid metabolic process proteinogenic amino acid catabolic process carboxylic acid catabolic process metabolic process cellular process small molecule metabolic process catabolic process oxoacid metabolic process L-amino acid catabolic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process branched-chain amino acid catabolic process L-amino acid metabolic process proteinogenic amino acid metabolic process proteinogenic amino acid catabolic process carboxylic acid catabolic process metabolic process cellular process small molecule metabolic process branched-chain amino acid metabolic process L-valine catabolic process small molecule catabolic process amino acid catabolic process fatty acid metabolic process lipid catabolic process lipid modification fatty acid catabolic process monocarboxylic acid catabolic process fatty acid oxidation fatty acid beta-oxidation monocarboxylic acid metabolic process lipid oxidation lipid metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen organelle lumen
B, C	Enoyl-CoA hydratase, mitochondrial	isomerase activity intramolecular oxidoreductase activity, transposing C=C bonds intramolecular oxidoreductase activity delta(3)-delta(2)-enoyl-CoA isomerase activity catalytic activity enoyl-CoA hydratase activity (2E)-butenoyl-CoA hydratase activity hydro-lyase activity 3-hydroxyacyl-CoA dehydratase activity lyase activity carbon-oxygen lyase activity 3-hydroxypropionyl-CoA dehydratase activity	catabolic process oxoacid metabolic process L-amino acid catabolic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process branched-chain amino acid catabolic process L-amino acid metabolic process proteinogenic amino acid metabolic process proteinogenic amino acid catabolic process carboxylic acid catabolic process metabolic process cellular process small molecule metabolic process catabolic process oxoacid metabolic process L-amino acid catabolic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process branched-chain amino acid catabolic process L-amino acid metabolic process proteinogenic amino acid metabolic process proteinogenic amino acid catabolic process carboxylic acid catabolic process metabolic process cellular process small molecule metabolic process branched-chain amino acid metabolic process L-valine catabolic process small molecule catabolic process amino acid catabolic process fatty acid metabolic process lipid catabolic process lipid modification fatty acid catabolic process monocarboxylic acid catabolic process fatty acid oxidation fatty acid beta-oxidation monocarboxylic acid metabolic process lipid oxidation lipid metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen organelle lumen
A, F	Enoyl-CoA hydratase, mitochondrial	isomerase activity intramolecular oxidoreductase activity, transposing C=C bonds intramolecular oxidoreductase activity delta(3)-delta(2)-enoyl-CoA isomerase activity catalytic activity enoyl-CoA hydratase activity (2E)-butenoyl-CoA hydratase activity hydro-lyase activity 3-hydroxyacyl-CoA dehydratase activity lyase activity carbon-oxygen lyase activity 3-hydroxypropionyl-CoA dehydratase activity	catabolic process oxoacid metabolic process L-amino acid catabolic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process branched-chain amino acid catabolic process L-amino acid metabolic process proteinogenic amino acid metabolic process proteinogenic amino acid catabolic process carboxylic acid catabolic process metabolic process cellular process small molecule metabolic process catabolic process oxoacid metabolic process L-amino acid catabolic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process branched-chain amino acid catabolic process L-amino acid metabolic process proteinogenic amino acid metabolic process proteinogenic amino acid catabolic process carboxylic acid catabolic process metabolic process cellular process small molecule metabolic process branched-chain amino acid metabolic process L-valine catabolic process small molecule catabolic process amino acid catabolic process fatty acid metabolic process lipid catabolic process lipid modification fatty acid catabolic process monocarboxylic acid catabolic process fatty acid oxidation fatty acid beta-oxidation monocarboxylic acid metabolic process lipid oxidation lipid metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen organelle lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E	IPR029045	ClpP/crotonase-like domain superfamily	Homologous Superfamily
E	IPR001753	Enoyl-CoA hydratase/isomerase-like domain	Domain
E	IPR018376	Enoyl-CoA hydratase/isomerase, conserved site	Conserved Site
E	IPR014748	Enoyl-CoA hydratase, C-terminal	Homologous Superfamily
D	IPR029045	ClpP/crotonase-like domain superfamily	Homologous Superfamily
D	IPR001753	Enoyl-CoA hydratase/isomerase-like domain	Domain
D	IPR018376	Enoyl-CoA hydratase/isomerase, conserved site	Conserved Site
D	IPR014748	Enoyl-CoA hydratase, C-terminal	Homologous Superfamily
B, C	IPR029045	ClpP/crotonase-like domain superfamily	Homologous Superfamily
B, C	IPR001753	Enoyl-CoA hydratase/isomerase-like domain	Domain
B, C	IPR018376	Enoyl-CoA hydratase/isomerase, conserved site	Conserved Site
B, C	IPR014748	Enoyl-CoA hydratase, C-terminal	Homologous Superfamily
A, F	IPR029045	ClpP/crotonase-like domain superfamily	Homologous Superfamily
A, F	IPR001753	Enoyl-CoA hydratase/isomerase-like domain	Domain
A, F	IPR018376	Enoyl-CoA hydratase/isomerase, conserved site	Conserved Site
A, F	IPR014748	Enoyl-CoA hydratase, C-terminal	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
E	CSO	Parent Component: CYS : AA0205 : L-cysteine sulfenic acid MOD:00210
D	CSD	Parent Component: CYS : AA0205 , AA0262 : L-cysteine sulfenic acid MOD:00210 , L-cysteine sulfinic acid MOD:00267
B, C	CSO	Parent Component: CYS : AA0205 , AA0262 , AA0205 : L-cysteine sulfenic acid MOD:00210 , L-cysteine sulfinic acid MOD:00267 , L-cysteine sulfenic acid MOD:00210
A, F	CSO	Parent Component: CYS : AA0205 , AA0262 , AA0205 , AA0205 : L-cysteine sulfenic acid MOD:00210 , L-cysteine sulfinic acid MOD:00267 , L-cysteine sulfenic acid MOD:00210 , L-cysteine sulfenic acid MOD:00210

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.