9QZF | pdb_00009qzf

Proximal A-C linker of Tetrahymena centriole, six repeating units

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
BB [auth AM], GC [auth Bm], I [auth J], N [auth O], PA [auth 4], BB [auth AM], GC [auth Bm], I [auth J], N [auth O], PA [auth 4], XA [auth AG]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], K [auth L], KA [auth v], L [auth M], Q [auth R], SA [auth 9], UA [auth AB], WA [auth AE]	PF00566	Rab-GTPase-TBC domain (RabGAP-TBC)	Rab-GTPase-TBC domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
FC [auth Bj], KC [auth Bu], M [auth N], OA [auth 2], VA [auth AC], FC [auth Bj], KC [auth Bu], M [auth N], OA [auth 2], VA [auth AC], XC [auth CH]	Unknown Protein Chain	-	-	-
CC [auth Bc], HC [auth Bn], J [auth K], JA [auth t], QA [auth 5], CC [auth Bc], HC [auth Bn], J [auth K], JA [auth t], QA [auth 5], TC [auth CA]	Unknown Protein Chain	-	-	-
BB [auth AM], GC [auth Bm], I [auth J], N [auth O], PA [auth 4], BB [auth AM], GC [auth Bm], I [auth J], N [auth O], PA [auth 4], XA [auth AG]	POC1 centriolar protein homolog	-	microtubule organizing center organization microtubule cytoskeleton organization cellular component organization organelle organization centrosome cycle cellular process microtubule-based process cell cycle cellular component organization or biogenesis cytoskeleton organization cell cycle process cell projection organization	cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular membraneless organelle cilium plasma membrane bounded cell projection intracellular organelle ciliary basal body cell projection microtubule organizing center cytoskeleton organelle membraneless organelle cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular membraneless organelle cilium plasma membrane bounded cell projection intracellular organelle ciliary basal body cell projection microtubule organizing center cytoskeleton organelle membraneless organelle microtubule cytoskeleton
EA [auth l], EC [auth Bg], G [auth H], LA [auth w], PC [auth B4], EA [auth l], EC [auth Bg], G [auth H], LA [auth w], PC [auth B4], ZB [auth BV]	Unknown Protein Chain	-	-	-
CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], K [auth L], KA [auth v], L [auth M], Q [auth R], SA [auth 9], UA [auth AB], WA [auth AE]	TBC1 domain family member 31	-	organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular process cellular component organization or biogenesis cilium organization cell projection assembly	cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular membraneless organelle cilium plasma membrane bounded cell projection intracellular organelle ciliary basal body cell projection microtubule organizing center cytoskeleton organelle membraneless organelle cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular membraneless organelle cilium plasma membrane bounded cell projection intracellular organelle ciliary basal body cell projection microtubule organizing center cytoskeleton organelle membraneless organelle microtubule cytoskeleton centrosome centriolar satellite
AA [auth d], BC [auth BZ], E [auth F], GA [auth o], LC [auth Bw], AA [auth d], BC [auth BZ], E [auth F], GA [auth o], LC [auth Bw], XB [auth BO]	Unknown Protein Chain	-	-	-
AC [auth BY], D [auth E], FA [auth n], H [auth I], NA [auth 1], AC [auth BY], D [auth E], FA [auth n], H [auth I], NA [auth 1], RA [auth 7]	Rab-GAP TBC domain-containing protein	-	organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular process cellular component organization or biogenesis cilium organization cell projection assembly	cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular membraneless organelle cilium plasma membrane bounded cell projection intracellular organelle ciliary basal body cell projection microtubule organizing center cytoskeleton organelle membraneless organelle cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular membraneless organelle cilium plasma membrane bounded cell projection intracellular organelle ciliary basal body cell projection microtubule organizing center cytoskeleton organelle membraneless organelle microtubule cytoskeleton centrosome
BA [auth f], C [auth D], DA [auth k], ED [auth CW], HA [auth q], BA [auth f], C [auth D], DA [auth k], ED [auth CW], HA [auth q], HD [auth Cd], IA [auth s], ID [auth Ch], JD [auth z], MA [auth y], WB [auth BK], YB [auth BR]	Centrosomal protein, putative	-	-	intracellular organelle microtubule organizing center cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle centriole intracellular membraneless organelle microtubule cytoskeleton cytoplasm
CD [auth CT], MB [auth Ai], PB [auth An], QB [auth Aq], SB [auth Av], CD [auth CT], MB [auth Ai], PB [auth An], QB [auth Aq], SB [auth Av], TB [auth Az], UB [auth A7], UC [auth CB], X [auth Z], YC [auth CI], Z [auth c], ZC [auth CM]	SWIM-type domain-containing protein	-	-	-
DB [auth AP], GD [auth Cc], JB [auth Aa], QC [auth B5], V [auth W], DB [auth AP], GD [auth Cc], JB [auth Aa], QC [auth B5], V [auth W], WC [auth CF]	Unknown Protein Chain	-	-	-
IB [auth AZ], OB [auth Am], RB [auth As], U [auth V], VC [auth CE], IB [auth AZ], OB [auth Am], RB [auth As], U [auth V], VC [auth CE], Y [auth a]	Unknown Protein Chain	-	-	-
DD [auth CV], FB [auth AS], MC [auth Bx], S [auth T], SC [auth B9], DD [auth CV], FB [auth AS], MC [auth Bx], S [auth T], SC [auth B9], YA [auth AH]	Unknown Protein Chain	-	-	-
EB [auth AR], LB [auth Ae], NB [auth Ak], R [auth S], RC [auth B8], EB [auth AR], LB [auth Ae], NB [auth Ak], R [auth S], RC [auth B8], W [auth X]	Unknown Protein Chain	-	-	-
AB [auth AK], AD [auth CO], IC [auth Bq], OC [auth B2], P [auth Q], AB [auth AK], AD [auth CO], IC [auth Bq], OC [auth B2], P [auth Q], TA [auth 0]	Unknown Protein Chain	-	-	-
HB [auth AW], KB [auth Ac], NC [auth B1], O [auth P], T [auth U], HB [auth AW], KB [auth Ac], NC [auth B1], O [auth P], T [auth U], ZA [auth AJ]	Unknown Protein Chain	-	-	-
A, B [auth C], BD [auth CP], CA [auth i], FD [auth Ca], A, B [auth C], BD [auth CP], CA [auth i], FD [auth Ca], VB [auth BD]	WD repeat WRAP73-like protein, putative	-	-	intracellular organelle microtubule organizing center cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle microtubule cytoskeleton protein-containing complex MWP complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
BB [auth AM], GC [auth Bm], I [auth J], N [auth O], PA [auth 4], BB [auth AM], GC [auth Bm], I [auth J], N [auth O], PA [auth 4], XA [auth AG]	IPR020472	PAC1/LIS1-like, WD-40 repeat	Repeat
BB [auth AM], GC [auth Bm], I [auth J], N [auth O], PA [auth 4], BB [auth AM], GC [auth Bm], I [auth J], N [auth O], PA [auth 4], XA [auth AG]	IPR001680	WD40 repeat	Repeat
BB [auth AM], GC [auth Bm], I [auth J], N [auth O], PA [auth 4], BB [auth AM], GC [auth Bm], I [auth J], N [auth O], PA [auth 4], XA [auth AG]	IPR019775	WD40 repeat, conserved site	Conserved Site
BB [auth AM], GC [auth Bm], I [auth J], N [auth O], PA [auth 4], BB [auth AM], GC [auth Bm], I [auth J], N [auth O], PA [auth 4], XA [auth AG]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
BB [auth AM], GC [auth Bm], I [auth J], N [auth O], PA [auth 4], BB [auth AM], GC [auth Bm], I [auth J], N [auth O], PA [auth 4], XA [auth AG]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], K [auth L], KA [auth v], L [auth M], Q [auth R], SA [auth 9], UA [auth AB], WA [auth AE]	IPR035969	Rab-GAP-TBC domain superfamily	Homologous Superfamily
CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], K [auth L], KA [auth v], L [auth M], Q [auth R], SA [auth 9], UA [auth AB], WA [auth AE]	IPR001680	WD40 repeat	Repeat
CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], K [auth L], KA [auth v], L [auth M], Q [auth R], SA [auth 9], UA [auth AB], WA [auth AE]	IPR000195	Rab-GAP-TBC domain	Domain
CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], K [auth L], KA [auth v], L [auth M], Q [auth R], SA [auth 9], UA [auth AB], WA [auth AE]	IPR019775	WD40 repeat, conserved site	Conserved Site
CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], K [auth L], KA [auth v], L [auth M], Q [auth R], SA [auth 9], UA [auth AB], WA [auth AE]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], K [auth L], KA [auth v], L [auth M], Q [auth R], SA [auth 9], UA [auth AB], WA [auth AE]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], CB [auth AO], DC [auth Bf], F [auth G], GB [auth AU], JC [auth Bt], K [auth L], KA [auth v], L [auth M], Q [auth R], SA [auth 9], UA [auth AB], WA [auth AE]	IPR051570	TBC1 domain family involved in cilium biogenesis	Family
AC [auth BY], D [auth E], FA [auth n], H [auth I], NA [auth 1], AC [auth BY], D [auth E], FA [auth n], H [auth I], NA [auth 1], RA [auth 7]	IPR035969	Rab-GAP-TBC domain superfamily	Homologous Superfamily
AC [auth BY], D [auth E], FA [auth n], H [auth I], NA [auth 1], AC [auth BY], D [auth E], FA [auth n], H [auth I], NA [auth 1], RA [auth 7]	IPR000195	Rab-GAP-TBC domain	Domain
AC [auth BY], D [auth E], FA [auth n], H [auth I], NA [auth 1], AC [auth BY], D [auth E], FA [auth n], H [auth I], NA [auth 1], RA [auth 7]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
AC [auth BY], D [auth E], FA [auth n], H [auth I], NA [auth 1], AC [auth BY], D [auth E], FA [auth n], H [auth I], NA [auth 1], RA [auth 7]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
AC [auth BY], D [auth E], FA [auth n], H [auth I], NA [auth 1], AC [auth BY], D [auth E], FA [auth n], H [auth I], NA [auth 1], RA [auth 7]	IPR051570	TBC1 domain family involved in cilium biogenesis	Family
BA [auth f], C [auth D], DA [auth k], ED [auth CW], HA [auth q], BA [auth f], C [auth D], DA [auth k], ED [auth CW], HA [auth q], HD [auth Cd], IA [auth s], ID [auth Ch], JD [auth z], MA [auth y], WB [auth BK], YB [auth BR]	IPR051877	Centriole and Basal Body Structural Protein	Family
A, B [auth C], BD [auth CP], CA [auth i], FD [auth Ca], A, B [auth C], BD [auth CP], CA [auth i], FD [auth Ca], VB [auth BD]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
A, B [auth C], BD [auth CP], CA [auth i], FD [auth Ca], A, B [auth C], BD [auth CP], CA [auth i], FD [auth Ca], VB [auth BD]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
A, B [auth C], BD [auth CP], CA [auth i], FD [auth Ca], A, B [auth C], BD [auth CP], CA [auth i], FD [auth Ca], VB [auth BD]	IPR052778	Centrosome-associated WD domain-containing protein	Family