9QFK | pdb_00009qfk

Cryo-EM structure of the Coronin-1B-decorated actin filament bound by one Cofilin-1 molecule (crosslinked)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
JSCOP2B SuperfamilyActin depolymerizing proteins 8038510 3000430 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00241Cofilin/tropomyosin-type actin-binding protein (Cofilin_ADF)Cofilin/tropomyosin-type actin-binding proteinSevers actin filaments and binds to actin monomers. Domain
H, I, K, L, M
PF16300Type of WD40 repeat (WD40_4)Type of WD40 repeat- Repeat
H, I, K, L, M
PF08953Domain of unknown function (DUF1899) (DUF1899)Domain of unknown function (DUF1899)- Repeat
H, I, K, L, M
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Cofilin-1
H, I, K, L, M
Coronin-1B,Methylated-DNA--protein-cysteine methyltransferase
A, B, C, D, E
Actin, cytoplasmic 1, N-terminally processed

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR017904ADF/CofilinFamily
IPR029006ADF-H/Gelsolin-like domain superfamilyHomologous Superfamily
IPR002108Actin-depolymerising factor homology domainDomain
H, I, K, L, M
IPR008332Methylguanine DNA methyltransferase, ribonuclease-like domainDomain
H, I, K, L, M
IPR036217Methylated DNA-protein cysteine methyltransferase, DNA binding domainHomologous Superfamily
H, I, K, L, M
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
H, I, K, L, M
IPR036631Methylated DNA-protein cysteine methyltransferase domain superfamilyHomologous Superfamily
H, I, K, L, M
IPR014048Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA bindingDomain
H, I, K, L, M
IPR001497Methylated-DNA-[protein]-cysteine S-methyltransferase, active siteActive Site
H, I, K, L, M
IPR015505CoroninFamily
H, I, K, L, M
IPR019775WD40 repeat, conserved siteConserved Site
H, I, K, L, M
IPR015048Domain of unknown function DUF1899Domain
H, I, K, L, M
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
H, I, K, L, M
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
H, I, K, L, M
IPR001680WD40 repeatRepeat
A, B, C, D, E
IPR020902Actin/actin-like conserved siteConserved Site
A, B, C, D, E
IPR004001Actin, conserved siteConserved Site
A, B, C, D, E
IPR043129ATPase, nucleotide binding domainHomologous Superfamily
A, B, C, D, E
IPR004000Actin familyFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP23528
H, I, K, L, M
PharosQ9BR76
A, B, C, D, E
PharosP60709

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B, C, D, E
HIC Parent Component: HIS

RESIDAA0317

PSI-MOD :  1'-methyl-L-histidine MOD:00322