9QEH | pdb_00009qeh

Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth D]Large ribosomal subunit protein uL3
H [auth C]Large ribosomal subunit protein uL2
G [auth B]5S rRNA---
F [auth A]23S rRNA---
E [auth L]Large ribosomal subunit protein bL17
D [auth 4]Large ribosomal subunit protein bL36
EA [auth 11]E_site tRNA---
DA [auth 8]P_site tRNA---
C [auth 3]Large ribosomal subunit protein bL35
CA [auth Z]Large ribosomal subunit protein bL32
BA [auth X]Large ribosomal subunit protein uL30
AA [auth W]Large ribosomal subunit protein uL29
Z [auth V]Large ribosomal subunit protein bL28
Y [auth U]Large ribosomal subunit protein bL27
X [auth T]50S ribosomal protein L25
W [auth S]Large ribosomal subunit protein uL24
V [auth R]Large ribosomal subunit protein uL23
U [auth Q]Large ribosomal subunit protein uL22
T [auth P]Large ribosomal subunit protein bL21
B [auth 2]Large ribosomal subunit protein bL34
S [auth O]Large ribosomal subunit protein bL20
R [auth N]Large ribosomal subunit protein bL19
Q [auth M]Large ribosomal subunit protein uL18
P [auth K]Large ribosomal subunit protein uL16
O [auth J]Large ribosomal subunit protein uL15
N [auth I]Large ribosomal subunit protein uL14
M [auth H]Large ribosomal subunit protein uL13
L [auth G]Large ribosomal subunit protein uL6
K [auth F]Large ribosomal subunit protein uL5
J [auth E]Large ribosomal subunit protein uL4
A [auth 1]Large ribosomal subunit protein bL33A

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth D]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
I [auth D]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
I [auth D]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
I [auth D]IPR000597Large ribosomal subunit protein uL3Family
H [auth C]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
H [auth C]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
H [auth C]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth C]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
H [auth C]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
H [auth C]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
H [auth C]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
H [auth C]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
H [auth C]IPR002171Large ribosomal subunit protein uL2Family
E [auth L]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
E [auth L]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
E [auth L]IPR000456Large ribosomal subunit protein bL17Family
D [auth 4]IPR000473Large ribosomal subunit protein bL36Family
D [auth 4]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
C [auth 3]IPR021137Large ribosomal subunit protein bL35-likeFamily
C [auth 3]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
C [auth 3]IPR001706Large ribosomal subunit protein bL35Family
C [auth 3]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
CA [auth Z]IPR002677Large ribosomal subunit protein bL32Family
CA [auth Z]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
CA [auth Z]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
BA [auth X]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
BA [auth X]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
BA [auth X]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
AA [auth W]IPR050063Universal ribosomal protein uL29Family
AA [auth W]IPR001854Large ribosomal subunit protein uL29Family
AA [auth W]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
Z [auth V]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
Z [auth V]IPR050096Bacterial ribosomal protein bL28Family
Z [auth V]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
Z [auth V]IPR026569Large ribosomal subunit protein bL28Family
Z [auth V]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
Y [auth U]IPR001684Large ribosomal subunit protein bL27Family
Y [auth U]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
X [auth T]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
X [auth T]IPR001021Ribosomal protein bL25, long-formFamily
X [auth T]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
X [auth T]IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
X [auth T]IPR020057Large ribosomal subunit protein bL25, beta domainDomain
X [auth T]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
X [auth T]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
W [auth S]IPR003256Large ribosomal subunit protein uL24Family
W [auth S]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
W [auth S]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
W [auth S]IPR005824KOWDomain
W [auth S]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth S]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
V [auth R]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
V [auth R]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
V [auth R]IPR013025Large ribosomal subunit protein uL23-likeFamily
U [auth Q]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
U [auth Q]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
U [auth Q]IPR001063Large ribosomal subunit protein uL22Family
U [auth Q]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
U [auth Q]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
T [auth P]IPR028909Large ribosomal subunit protein bL21-likeFamily
T [auth P]IPR001787Large ribosomal subunit protein bL21Family
T [auth P]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
B [auth 2]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
B [auth 2]IPR000271Large ribosomal subunit protein bL34Family
S [auth O]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
S [auth O]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
S [auth O]IPR005813Large ribosomal subunit protein bL20Family
R [auth N]IPR001857Large ribosomal subunit protein bL19Family
R [auth N]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
R [auth N]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
R [auth N]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth M]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
Q [auth M]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
P [auth K]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
P [auth K]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
P [auth K]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
P [auth K]IPR016180Large ribosomal subunit protein uL16 domainDomain
P [auth K]IPR047873Large ribosomal subunit protein uL16Family
O [auth J]IPR021131Large ribosomal subunit protein uL15/eL18Domain
O [auth J]IPR030878Large ribosomal subunit protein uL15Family
O [auth J]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
O [auth J]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
O [auth J]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
N [auth I]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
N [auth I]IPR000218Large ribosomal subunit protein uL14Family
N [auth I]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
N [auth I]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
M [auth H]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
M [auth H]IPR005822Large ribosomal subunit protein uL13Family
M [auth H]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
M [auth H]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
L [auth G]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
L [auth G]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
L [auth G]IPR000702Large ribosomal subunit protein uL6-likeFamily
L [auth G]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
L [auth G]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
K [auth F]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
K [auth F]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
K [auth F]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
K [auth F]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
K [auth F]IPR002132Large ribosomal subunit protein uL5Family
K [auth F]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
J [auth E]IPR013005Large ribosomal subunit protein uL4-likeFamily
J [auth E]IPR002136Large ribosomal subunit protein uL4Family
J [auth E]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
A [auth 1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
A [auth 1]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
A [auth 1]IPR001705Large ribosomal subunit protein bL33Family
A [auth 1]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site