9P4Q | pdb_00009p4q

Cryo-EM structure of AAV.CAP-B10 complexed to AAVR-PKD2

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Capsid protein VP1	structural molecule activity	-	viral capsid icosahedral viral capsid virion component T=1 icosahedral viral capsid
B [auth R]	Dyslexia-associated protein KIAA0319-like protein	-	response to auditory stimulus response to stimulus response to mechanical stimulus response to abiotic stimulus response to external stimulus developmental process spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process developmental process involved in reproduction male gamete generation gamete generation import into cell response to auditory stimulus response to stimulus response to mechanical stimulus response to abiotic stimulus response to external stimulus developmental process spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process developmental process involved in reproduction male gamete generation gamete generation import into cell receptor-mediated endocytosis of virus by host cell biological process involved in interspecies interaction between organisms transport viral life cycle establishment of localization biological process involved in interaction with host vesicle-mediated transport biological process involved in symbiotic interaction localization symbiont entry into host cell viral process symbiont entry into host cellular process endocytosis involved in viral entry into host cell receptor-mediated endocytosis endocytosis multicellular organismal process neuron migration cellular developmental process nervous system development generation of neurons neurogenesis multicellular organism development cell differentiation anatomical structure development cell migration cell motility system development spermatid development spermatid differentiation cellular component assembly involved in morphogenesis cell development cellular process involved in reproduction in multicellular organism cellular component organization cellular component biogenesis vesicle organization cellular anatomical entity morphogenesis cellular component assembly cellular component organization or biogenesis endomembrane system organization organelle assembly secretory granule organization anatomical structure morphogenesis organelle organization anatomical structure formation involved in morphogenesis germ cell development acrosome assembly membrane fusion organelle membrane fusion proacrosomal vesicle fusion membrane organization organelle fusion vesicle fusion sperm motility cilium movement involved in cell motility cilium or flagellum-dependent cell motility cilium-dependent cell motility flagellated sperm motility microtubule-based movement microtubule-based process cilium movement	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoplasmic vesicle organelle intracellular vesicle cytoplasm intracellular membrane-bounded organelle vesicle nucleus membrane-enclosed lumen intracellular membraneless organelle nucleolus membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoplasmic vesicle organelle intracellular vesicle cytoplasm intracellular membrane-bounded organelle vesicle nucleus membrane-enclosed lumen intracellular membraneless organelle nucleolus intracellular organelle lumen organelle lumen membraneless organelle nuclear lumen membrane Golgi apparatus subcompartment Golgi apparatus organelle subcompartment endomembrane system trans-Golgi network Golgi membrane bounding membrane of organelle organelle membrane cell periphery plasma membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR013607	Phospholipase A2-like domain	Domain
A	IPR016184	Capsid/spike protein, ssDNA virus	Homologous Superfamily
A	IPR001403	Coat protein VP1/VP2, Parvovirus	Domain
A	IPR036952	Parvovirus coat protein VP1/VP2	Homologous Superfamily
B [auth R]	IPR022409	PKD/Chitinase domain	Domain
B [auth R]	IPR000601	PKD domain	Domain
B [auth R]	IPR035986	PKD domain superfamily	Homologous Superfamily
B [auth R]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
B [auth R]	IPR056502	KIAA0319-like, C-terminal domain	Domain
B [auth R]	IPR029865	Dyslexia-associated protein KIAA0319-like	Family
B [auth R]	IPR013980	MANSC domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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Cryo-EM structure of AAV.CAP-B10 complexed to AAVR-PKD2

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

9P4Q | pdb_00009p4q