9OU7 | pdb_00009ou7

Methanosarcina acetivorans large (50S) subunit dimer

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
F [auth BF], LA [auth CF]	PF00281	Ribosomal protein L5 (Ribosomal_L5)	Ribosomal protein L5		Domain
F [auth BF], LA [auth CF]	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain
I [auth BI], OA [auth CI]	PF00252	Ribosomal protein L16p/L10e (Ribosomal_L16)	Ribosomal protein L16p/L10e		Domain
N [auth BN], TA [auth CN]	PF17144	Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)	Ribosomal large subunit proteins 60S L5, and 50S L18	-	Family
AB [auth CU], U [auth BU]	PF16906	Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)	Ribosomal proteins L26 eukaryotic, L24P archaeal	-	Family
AB [auth CU], U [auth BU]	PF00467	KOW motif (KOW)	KOW motif	-	Family
BB [auth CV], V [auth BV]	PF01246	Ribosomal protein L24e (Ribosomal_L24e)	Ribosomal protein L24e		Domain
H [auth BH], NA [auth CH]	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
G [auth BG], MA [auth CG]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6		Domain
E [auth BE], KA [auth CE]	PF01020	Ribosomal L40e family (Ribosomal_L40e)	Ribosomal L40e family	Bovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2].	Domain
E [auth BE], KA [auth CE]	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family
D [auth BD], JA [auth CD]	PF00832	Ribosomal L39 protein (Ribosomal_L39)	Ribosomal L39 protein	-	Family
D [auth BD], JA [auth CD]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
OB [auth DC], PB [auth DD]	PF00679	Elongation factor G C-terminus (EFG_C)	Elongation factor G C-terminus	This domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold.	Domain
OB [auth DC], PB [auth DD]	PF00009	Elongation factor Tu GTP binding domain (GTP_EFTU)	Elongation factor Tu GTP binding domain	This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.	Domain
OB [auth DC], PB [auth DD]	PF14492	Elongation Factor G, domain III (EFG_III)	Elongation Factor G, domain III	This domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1].	Domain
OB [auth DC], PB [auth DD]	PF03144	Elongation factor Tu domain 2 (GTP_EFTU_D2)	Elongation factor Tu domain 2	Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...	Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.	Domain
OB [auth DC], PB [auth DD]	PF03764	Elongation factor G, domain IV (EFG_IV)	Elongation factor G, domain IV	This domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold.	Domain
C [auth BC], IA [auth CC]	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain		Domain
C [auth BC], IA [auth CC]	PF00181	Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)	Ribosomal Proteins L2, RNA binding N-terminal domain		Domain
C [auth BC], IA [auth CC]	PF01907	Ribosomal protein L37e (Ribosomal_L37e)	Ribosomal protein L37e	-	Family
FB [auth CZ], Z [auth BZ]	PF01198	Ribosomal protein L31e (Ribosomal_L31e)	Ribosomal protein L31e	-	Family
DB [auth CX], X [auth BX]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
CB [auth CW], W [auth BW]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
T [auth BT], ZA [auth CT]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
S [auth BS], YA [auth CS]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
O [auth BO], UA [auth CO]	PF17135	Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)	Ribosomal protein 60S L18 and 50S L18e	-	Family
M [auth BM], SA [auth CM]	PF00827	Ribosomal L15 (Ribosomal_L15e)	Ribosomal L15	-	Family
L [auth BL], RA [auth CL]	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins.	Domain
K [auth BK], QA [auth CK]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
F [auth BF], LA [auth CF]	Large ribosomal subunit protein uL5	RNA binding binding rRNA binding nucleic acid binding tRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
I [auth BI], OA [auth CI]	Large ribosomal subunit protein uL16	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
N [auth BN], TA [auth CN]	Large ribosomal subunit protein uL18	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
P [auth BP], VA [auth CP]	Large ribosomal subunit protein eL19	RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
R [auth BR], XA [auth CR]	Large ribosomal subunit protein eL21	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
AB [auth CU], U [auth BU]	Large ribosomal subunit protein uL24	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular component organization or biogenesis ribosomal large subunit biogenesis	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
BB [auth CV], V [auth BV]	Large ribosomal subunit protein eL24	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
BA [auth Bb], HB [auth Cb]	Large ribosomal subunit protein eL43	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
EA [auth Be], KB [auth Ce]	Large ribosomal subunit protein eL40	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
H [auth BH], NA [auth CH]	Large ribosomal subunit protein eL8	RNA binding binding rRNA binding nucleic acid binding tRNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity catalytic activity, acting on a tRNA hydrolase activity nuclease activity hydrolase activity, acting on ester bonds RNA binding binding rRNA binding nucleic acid binding tRNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity catalytic activity, acting on a tRNA hydrolase activity nuclease activity hydrolase activity, acting on ester bonds RNA endonuclease activity ribonuclease P activity catalytic activity structural molecule activity structural constituent of ribosome	RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process tRNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process tRNA processing RNA 5'-end processing metabolic process RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process tRNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process tRNA processing RNA 5'-end processing metabolic process cellular process macromolecule metabolic process RNA processing tRNA 5'-leader removal tRNA 5'-end processing cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular component organization or biogenesis protein metabolic process translation protein biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
G [auth BG], MA [auth CG]	Large ribosomal subunit protein uL6	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
E [auth BE], KA [auth CE]	Large ribosomal subunit protein uL4	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
D [auth BD], JA [auth CD]	Large ribosomal subunit protein uL3	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
OB [auth DC], PB [auth DD]	Elongation factor 2	translation factor activity translation elongation factor activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding translation factor activity translation elongation factor activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	primary metabolic process translation gene expression macromolecule biosynthetic process protein biosynthetic process biosynthetic process translational elongation metabolic process cellular process macromolecule metabolic process protein metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex ribonucleoprotein complex
MB [auth DA], NB [auth DB]	Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IMP cyclohydrolase activity cyclohydrolase activity hydrolase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds phosphoribosylaminoimidazolecarboxamide formyltransferase activity transferase activity, transferring one-carbon groups transferase activity hydroxymethyl-, formyl- and related transferase activity	nucleoside phosphate metabolic process pyrimidine-containing compound metabolic process nucleotide biosynthetic process primary metabolic process nucleobase-containing compound biosynthetic process nucleotide metabolic process pyrimidine nucleotide metabolic process nucleobase-containing compound metabolic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process nucleobase-containing small molecule metabolic process nucleoside phosphate biosynthetic process phosphate-containing compound metabolic process nucleoside phosphate metabolic process pyrimidine-containing compound metabolic process nucleotide biosynthetic process primary metabolic process nucleobase-containing compound biosynthetic process nucleotide metabolic process pyrimidine nucleotide metabolic process nucleobase-containing compound metabolic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process nucleobase-containing small molecule metabolic process nucleoside phosphate biosynthetic process phosphate-containing compound metabolic process metabolic process cellular process small molecule metabolic process pyrimidine-containing compound biosynthetic process phosphorus metabolic process pyrimidine nucleotide biosynthetic process ribose phosphate metabolic process IMP metabolic process purine ribonucleoside monophosphate biosynthetic process carbohydrate derivative metabolic process purine ribonucleotide biosynthetic process ribonucleotide biosynthetic process purine nucleoside monophosphate biosynthetic process purine ribonucleoside monophosphate metabolic process purine nucleotide metabolic process ribonucleotide metabolic process purine-containing compound biosynthetic process purine nucleoside monophosphate metabolic process ribose phosphate biosynthetic process nucleoside monophosphate metabolic process carbohydrate derivative biosynthetic process nucleoside monophosphate biosynthetic process purine-containing compound metabolic process IMP biosynthetic process 'de novo' IMP biosynthetic process purine ribonucleotide metabolic process ribonucleoside monophosphate biosynthetic process purine nucleotide biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol
FA [auth Bf], LB [auth Cf]	Large ribosomal subunit protein eL42	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
DA [auth Bd], JB [auth Cd]	Large ribosomal subunit protein eL39	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
C [auth BC], IA [auth CC]	Large ribosomal subunit protein uL2	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
CA [auth Bc], IB [auth Cc]	Large ribosomal subunit protein eL37	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
AA [auth Ba], GB [auth Ca]	Large ribosomal subunit protein eL32	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
FB [auth CZ], Z [auth BZ]	Large ribosomal subunit protein eL31	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
EB [auth CY], Y [auth BY]	Large ribosomal subunit protein eL30	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
DB [auth CX], X [auth BX]	Large ribosomal subunit protein uL30	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process ribosomal large subunit biogenesis macromolecule biosynthetic process nucleic acid metabolic process maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) biosynthetic process cellular process metabolic process macromolecule metabolic process maturation of LSU-rRNA protein metabolic process translation protein biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
CB [auth CW], W [auth BW]	Large ribosomal subunit protein uL29	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
T [auth BT], ZA [auth CT]	Large ribosomal subunit protein uL23	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
B [auth BB], HA [auth CB]	5S rRNA	-	-	-
S [auth BS], YA [auth CS]	Large ribosomal subunit protein uL22	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Q [auth BQ], WA [auth CQ]	Large ribosomal subunit protein eL20	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
O [auth BO], UA [auth CO]	Large ribosomal subunit protein eL18	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
M [auth BM], SA [auth CM]	Large ribosomal subunit protein eL15	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
L [auth BL], RA [auth CL]	Large ribosomal subunit protein uL15	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
K [auth BK], QA [auth CK]	Large ribosomal subunit protein uL14	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
J [auth BJ], PA [auth CJ]	Large ribosomal subunit protein uL13	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
A [auth BA], GA [auth CA]	23S rRNA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
F [auth BF], LA [auth CF]	IPR020929	Large ribosomal subunit protein uL5, conserved site	Conserved Site
F [auth BF], LA [auth CF]	IPR022803	Large ribosomal subunit protein uL5 domain superfamily	Homologous Superfamily
F [auth BF], LA [auth CF]	IPR031309	Large ribosomal subunit protein uL5, C-terminal	Domain
F [auth BF], LA [auth CF]	IPR057266	Large ribosomal subunit protein uL5, eukaryota/archaea	Family
F [auth BF], LA [auth CF]	IPR022804	Large ribosomal subunit protein uL5, archaea	Family
F [auth BF], LA [auth CF]	IPR031310	Large ribosomal subunit protein uL5, N-terminal	Domain
F [auth BF], LA [auth CF]	IPR002132	Large ribosomal subunit protein uL5	Family
I [auth BI], OA [auth CI]	IPR001197	Large ribosomal subunit protein uL16, eukaryota/archaea	Family
I [auth BI], OA [auth CI]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
I [auth BI], OA [auth CI]	IPR018255	Large ribosomal subunit protein uL16, conserved site, eukaryota/archaea	Conserved Site
I [auth BI], OA [auth CI]	IPR022981	Large ribosomal subunit protein uL16, archaea	Family
I [auth BI], OA [auth CI]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
I [auth BI], OA [auth CI]	IPR047873	Large ribosomal subunit protein uL16	Family
N [auth BN], TA [auth CN]	IPR057268	Large ribosomal subunit protein uL18	Family
N [auth BN], TA [auth CN]	IPR057267	Large ribosomal subunit protein uL18, archaea	Family
N [auth BN], TA [auth CN]	IPR005485	Large ribosomal subunit protein uL18, eukaryota/archaea	Family
P [auth BP], VA [auth CP]	IPR015974	Large ribosomal subunit protein eL19, domain 3	Homologous Superfamily
P [auth BP], VA [auth CP]	IPR039547	Large ribosomal subunit protein eL19	Family
P [auth BP], VA [auth CP]	IPR057260	Ribosomal protein L19e, C-terminal domain	Domain
P [auth BP], VA [auth CP]	IPR033936	Large ribosomal subunit protein eL19, archaea	Domain
P [auth BP], VA [auth CP]	IPR015973	Large ribosomal subunit protein eL19, domain 2	Homologous Superfamily
P [auth BP], VA [auth CP]	IPR015972	Large ribosomal subunit protein eL19, domain 1	Homologous Superfamily
P [auth BP], VA [auth CP]	IPR057259	Ribosomal protein L19e, N-terminal domain	Domain
P [auth BP], VA [auth CP]	IPR035970	Large ribosomal subunit protein eL19 superfamily	Homologous Superfamily
P [auth BP], VA [auth CP]	IPR000196	Large ribosomal subunit protein eL19 domain	Domain
R [auth BR], XA [auth CR]	IPR018259	Large ribosomal subunit protein eL21, conserved site	Conserved Site
R [auth BR], XA [auth CR]	IPR036948	Large ribosomal subunit protein eL21 superfamily	Homologous Superfamily
R [auth BR], XA [auth CR]	IPR022856	Large ribosomal subunit protein eL21, archaea	Family
R [auth BR], XA [auth CR]	IPR001147	Large ribosomal subunit protein eL21	Family
R [auth BR], XA [auth CR]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
AB [auth CU], U [auth BU]	IPR005756	Large ribosomal subunit protein uL24, eukaryota_archaea	Family
AB [auth CU], U [auth BU]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
AB [auth CU], U [auth BU]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
AB [auth CU], U [auth BU]	IPR005824	KOW	Domain
AB [auth CU], U [auth BU]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
AB [auth CU], U [auth BU]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
BB [auth CV], V [auth BV]	IPR011017	TRASH domain	Domain
BB [auth CV], V [auth BV]	IPR000988	Large ribosomal subunit protein eL24-related, N-terminal	Domain
BB [auth CV], V [auth BV]	IPR055345	Large ribosomal subunit protein eL24-like, archaea	Family
BB [auth CV], V [auth BV]	IPR023442	Large ribosomal subunit protein eL24, conserved site	Conserved Site
BB [auth CV], V [auth BV]	IPR038630	Ribosomal protein L24e/L24 superfamily	Homologous Superfamily
BA [auth Bb], HB [auth Cb]	IPR002674	Large ribosomal subunit protein eL43	Family
BA [auth Bb], HB [auth Cb]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
BA [auth Bb], HB [auth Cb]	IPR011331	Large ribosomal subunit protein eL37/eL43	Homologous Superfamily
BA [auth Bb], HB [auth Cb]	IPR050522	Eukaryotic ribosomal protein eL43	Family
EA [auth Be], KB [auth Ce]	IPR023657	Large ribosomal subunit protein eL40, archaea	Family
EA [auth Be], KB [auth Ce]	IPR001975	Large ribosomal subunit protein eL40 domain	Domain
EA [auth Be], KB [auth Ce]	IPR038587	Large ribosomal subunit protein eL40 superfamily	Homologous Superfamily
EA [auth Be], KB [auth Ce]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
H [auth BH], NA [auth CH]	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
H [auth BH], NA [auth CH]	IPR022481	Large ribosomal subunit protein eL8, archaea	Family
H [auth BH], NA [auth CH]	IPR004037	Large ribosomal subunit protein eL8-like, conserved site	Conserved Site
H [auth BH], NA [auth CH]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
H [auth BH], NA [auth CH]	IPR018492	Ribosomal protein eL8/Nhp2 family	Family
G [auth BG], MA [auth CG]	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
G [auth BG], MA [auth CG]	IPR019907	Large ribosomal subunit protein uL6, archaea	Family
G [auth BG], MA [auth CG]	IPR002359	Large ribosomal subunit protein uL6, conserved site-2	Conserved Site
G [auth BG], MA [auth CG]	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
G [auth BG], MA [auth CG]	IPR000702	Large ribosomal subunit protein uL6-like	Family
E [auth BE], KA [auth CE]	IPR019970	Large ribosomal subunit protein uL4, archaea	Family
E [auth BE], KA [auth CE]	IPR002136	Large ribosomal subunit protein uL4	Family
E [auth BE], KA [auth CE]	IPR013000	Large ribosomal subunit protein uL4, eukaryota/archaea, conserved site	Conserved Site
E [auth BE], KA [auth CE]	IPR045240	Large ribosomal subunit protein uL4, eukaryota/archaea	Family
E [auth BE], KA [auth CE]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
D [auth BD], JA [auth CD]	IPR019928	Large ribosomal subunit protein uL3, archaea	Family
D [auth BD], JA [auth CD]	IPR019926	Large ribosomal subunit protein uL3, conserved site	Conserved Site
D [auth BD], JA [auth CD]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
D [auth BD], JA [auth CD]	IPR044892	Ribosomal protein L3, domain 3, archaeal-type superfamily	Homologous Superfamily
D [auth BD], JA [auth CD]	IPR000597	Large ribosomal subunit protein uL3	Family
D [auth BD], JA [auth CD]	IPR045077	Large ribosomal subunit protein uL3, archaea/eukaryota	Family
OB [auth DC], PB [auth DD]	IPR005225	Small GTP-binding domain	Domain
OB [auth DC], PB [auth DD]	IPR005517	Translation elongation factor EFG/EF2, domain IV	Domain
OB [auth DC], PB [auth DD]	IPR004543	Translation elongation factor EFG/EF2, archaeal	Family
OB [auth DC], PB [auth DD]	IPR000795	Translational (tr)-type GTP-binding domain	Domain
OB [auth DC], PB [auth DD]	IPR000640	Elongation factor EFG, domain V-like	Domain
OB [auth DC], PB [auth DD]	IPR031157	Tr-type G domain, conserved site	Conserved Site
OB [auth DC], PB [auth DD]	IPR035647	EF-G domain III/V-like	Homologous Superfamily
OB [auth DC], PB [auth DD]	IPR041095	Elongation Factor G, domain II	Domain
OB [auth DC], PB [auth DD]	IPR004161	Translation elongation factor EFTu-like, domain 2	Domain
OB [auth DC], PB [auth DD]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
OB [auth DC], PB [auth DD]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
OB [auth DC], PB [auth DD]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
OB [auth DC], PB [auth DD]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
MB [auth DA], NB [auth DB]	IPR024051	AICAR transformylase, duplicated domain superfamily	Homologous Superfamily
MB [auth DA], NB [auth DB]	IPR011607	Methylglyoxal synthase-like domain	Domain
MB [auth DA], NB [auth DB]	IPR036914	Methylglyoxal synthase-like domain superfamily	Homologous Superfamily
MB [auth DA], NB [auth DB]	IPR002695	Bifunctional purine biosynthesis protein PurH-like	Family
MB [auth DA], NB [auth DB]	IPR016193	Cytidine deaminase-like	Homologous Superfamily
FA [auth Bf], LB [auth Cf]	IPR053708	Eukaryotic Ribosomal Large Subunit eL42	Homologous Superfamily
FA [auth Bf], LB [auth Cf]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
FA [auth Bf], LB [auth Cf]	IPR000552	Large ribosomal subunit protein eL42	Family
DA [auth Bd], JB [auth Cd]	IPR023626	Large ribosomal subunit protein eL39 domain superfamily	Homologous Superfamily
DA [auth Bd], JB [auth Cd]	IPR000077	Large ribosomal subunit protein eL39	Family
DA [auth Bd], JB [auth Cd]	IPR020083	Large ribosomal subunit protein eL39, conserved site	Conserved Site
C [auth BC], IA [auth CC]	IPR023672	Large ribosomal subunit protein uL2, archaea/eukaryota	Family
C [auth BC], IA [auth CC]	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
C [auth BC], IA [auth CC]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
C [auth BC], IA [auth CC]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
C [auth BC], IA [auth CC]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
C [auth BC], IA [auth CC]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
C [auth BC], IA [auth CC]	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
C [auth BC], IA [auth CC]	IPR002171	Large ribosomal subunit protein uL2	Family
CA [auth Bc], IB [auth Cc]	IPR001569	Large ribosomal subunit protein eL37	Family
CA [auth Bc], IB [auth Cc]	IPR018267	Large ribosomal subunit protein eL37, conserved site	Conserved Site
CA [auth Bc], IB [auth Cc]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
CA [auth Bc], IB [auth Cc]	IPR011331	Large ribosomal subunit protein eL37/eL43	Homologous Superfamily
AA [auth Ba], GB [auth Ca]	IPR036351	Large ribosomal subunit protein eL32 superfamily	Homologous Superfamily
AA [auth Ba], GB [auth Ca]	IPR023654	Large ribosomal subunit protein eL32, archaea	Family
AA [auth Ba], GB [auth Ca]	IPR001515	Large ribosomal subunit protein eL32	Family
AA [auth Ba], GB [auth Ca]	IPR018263	Large ribosomal subunit protein eL32, conserved site	Conserved Site
FB [auth CZ], Z [auth BZ]	IPR020052	Large ribosomal subunit protein eL31, conserved site	Conserved Site
FB [auth CZ], Z [auth BZ]	IPR023621	Large ribosomal subunit protein eL31 domain superfamily	Homologous Superfamily
FB [auth CZ], Z [auth BZ]	IPR000054	Large ribosomal subunit protein eL31	Family
EB [auth CY], Y [auth BY]	IPR022991	Large ribosomal subunit protein eL30, conserved site	Conserved Site
EB [auth CY], Y [auth BY]	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
EB [auth CY], Y [auth BY]	IPR000231	Large ribosomal subunit protein eL30	Family
EB [auth CY], Y [auth BY]	IPR039109	Large ribosomal subunit protein eL30-like	Family
EB [auth CY], Y [auth BY]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
DB [auth CX], X [auth BX]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
DB [auth CX], X [auth BX]	IPR039699	Large ribosomal subunit protein uL30	Family
DB [auth CX], X [auth BX]	IPR035808	Large ribosomal subunit protein uL30, eukaryota/archaea	Domain
DB [auth CX], X [auth BX]	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain
DB [auth CX], X [auth BX]	IPR018038	Large ribosomal subunit protein uL30, conserved site	Conserved Site
DB [auth CX], X [auth BX]	IPR005997	Large ribosomal subunit protein uL30, archaea	Family
CB [auth CW], W [auth BW]	IPR001854	Large ribosomal subunit protein uL29	Family
CB [auth CW], W [auth BW]	IPR036049	Large ribosomal subunit protein uL29 superfamily	Homologous Superfamily
CB [auth CW], W [auth BW]	IPR018254	Large ribosomal subunit protein uL29, conserved site	Conserved Site
T [auth BT], ZA [auth CT]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
T [auth BT], ZA [auth CT]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
T [auth BT], ZA [auth CT]	IPR019985	Large ribosomal subunit protein uL23	Family
T [auth BT], ZA [auth CT]	IPR013025	Large ribosomal subunit protein uL23-like	Family
S [auth BS], YA [auth CS]	IPR005721	Large ribosomal subunit protein uL22, eukaryota/archaea	Family
S [auth BS], YA [auth CS]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
S [auth BS], YA [auth CS]	IPR001063	Large ribosomal subunit protein uL22	Family
S [auth BS], YA [auth CS]	IPR057265	Large ribosomal subunit protein uL22, archaea	Family
Q [auth BQ], WA [auth CQ]	IPR028877	Large ribosomal subunit protein eL20	Family
Q [auth BQ], WA [auth CQ]	IPR023573	Large ribosomal subunit protein eL20 domain	Domain
O [auth BO], UA [auth CO]	IPR022947	Large ribosomal subunit protein eL18, archaea	Family
O [auth BO], UA [auth CO]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
O [auth BO], UA [auth CO]	IPR021132	Large ribosomal subunit protein eL18, conserved site	Conserved Site
O [auth BO], UA [auth CO]	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
O [auth BO], UA [auth CO]	IPR000039	Large ribosomal subunit protein eL18	Family
O [auth BO], UA [auth CO]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
M [auth BM], SA [auth CM]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
M [auth BM], SA [auth CM]	IPR020925	Large ribosomal subunit protein eL15, conserved site	Conserved Site
M [auth BM], SA [auth CM]	IPR024794	Large ribosomal subunit protein eL15 core domain superfamily	Homologous Superfamily
M [auth BM], SA [auth CM]	IPR020926	Large ribosomal subunit protein eL15, archaeal	Family
M [auth BM], SA [auth CM]	IPR000439	Large ribosomal subunit protein eL15	Family
L [auth BL], RA [auth CL]	IPR027386	Ribosomal uL15, N-terminal	Homologous Superfamily
L [auth BL], RA [auth CL]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
L [auth BL], RA [auth CL]	IPR030878	Large ribosomal subunit protein uL15	Family
L [auth BL], RA [auth CL]	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
L [auth BL], RA [auth CL]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
K [auth BK], QA [auth CK]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
K [auth BK], QA [auth CK]	IPR000218	Large ribosomal subunit protein uL14	Family
K [auth BK], QA [auth CK]	IPR019971	Large ribosomal subunit protein uL14, archaea	Family
K [auth BK], QA [auth CK]	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
J [auth BJ], PA [auth CJ]	IPR023563	Large ribosomal subunit protein uL13, conserved site	Conserved Site
J [auth BJ], PA [auth CJ]	IPR005822	Large ribosomal subunit protein uL13	Family
J [auth BJ], PA [auth CJ]	IPR005823	Large ribosomal subunit protein uL13, bacteria	Family
J [auth BJ], PA [auth CJ]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
J [auth BJ], PA [auth CJ]	IPR005755	Large ribosomal subunit protein uL13, eukaryota/archaea	Family