Annotations: 9O5D

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth D]	GATOR complex protein NPRL2	GTPase regulator activity enzyme regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity molecular function regulator activity	cellular response to stimulus response to nutrient levels response to stimulus cellular response to amino acid starvation cellular response to starvation cellular response to nutrient levels cellular response to stress response to stress response to amino acid starvation cellular process response to starvation positive regulation of autophagy regulation of biological process catabolic process cellular response to stimulus response to nutrient levels response to stimulus cellular response to amino acid starvation cellular response to starvation cellular response to nutrient levels cellular response to stress response to stress response to amino acid starvation cellular process response to starvation positive regulation of autophagy regulation of biological process catabolic process regulation of cellular process autophagy biological regulation positive regulation of biological process regulation of catabolic process regulation of autophagy positive regulation of catabolic process positive regulation of metabolic process metabolic process process utilizing autophagic mechanism regulation of metabolic process positive regulation of cellular process signaling negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of biological process regulation of signal transduction intracellular signal transduction negative regulation of cell communication cell communication negative regulation of TORC1 signaling regulation of intracellular signal transduction negative regulation of TOR signaling negative regulation of cellular process signal transduction regulation of TORC1 signaling TOR signaling regulation of signaling regulation of TOR signaling negative regulation of response to stimulus negative regulation of signal transduction regulation of response to stimulus regulation of cell communication TORC1 signaling regulation of catalytic activity negative regulation of catalytic activity negative regulation of phosphate metabolic process regulation of transferase activity negative regulation of kinase activity phosphate-containing compound metabolic process phosphorus metabolic process phosphorylation negative regulation of metabolic process negative regulation of molecular function regulation of molecular function regulation of kinase activity negative regulation of phosphorus metabolic process regulation of phosphorylation regulation of phosphorus metabolic process negative regulation of phosphorylation	protein-containing complex GATOR1 complex Seh1-associated complex vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane vacuole intracellular membrane-bounded organelle intracellular organelle bounding membrane of organelle cellular anatomical structure organelle cytoplasm protein-containing complex GATOR1 complex Seh1-associated complex vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane vacuole intracellular membrane-bounded organelle intracellular organelle bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane lytic vacuole lytic vacuole membrane lysosomal membrane lysosome
B	GATOR1 complex protein DEPDC5	small GTPase binding protein binding binding enzyme binding GTPase binding protein-containing complex binding GTPase regulator activity enzyme regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity molecular function regulator activity	cellular response to stimulus regulation of cellular process response to stimulus signaling negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of biological process regulation of signal transduction intracellular signal transduction negative regulation of cell communication cell communication negative regulation of TORC1 signaling regulation of intracellular signal transduction negative regulation of TOR signaling negative regulation of cellular process cellular response to stimulus regulation of cellular process response to stimulus signaling negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of biological process regulation of signal transduction intracellular signal transduction negative regulation of cell communication cell communication negative regulation of TORC1 signaling regulation of intracellular signal transduction negative regulation of TOR signaling negative regulation of cellular process signal transduction regulation of TORC1 signaling TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling negative regulation of response to stimulus biological regulation negative regulation of signal transduction regulation of response to stimulus regulation of cell communication cellular process TORC1 signaling response to nutrient levels cellular response to amino acid starvation cellular response to starvation cellular response to nutrient levels cellular response to stress response to stress response to amino acid starvation response to starvation positive regulation of autophagy catabolic process autophagy positive regulation of biological process regulation of catabolic process regulation of autophagy positive regulation of catabolic process positive regulation of metabolic process metabolic process process utilizing autophagic mechanism regulation of metabolic process positive regulation of cellular process	vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle lysosomal membrane cytoplasm vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle lysosomal membrane cytoplasm organelle membrane lysosome cytosol perinuclear region of cytoplasm protein-containing complex GATOR1 complex Seh1-associated complex
C [auth A]	S-adenosylmethionine sensor upstream of mTORC1	transferase activity, transferring one-carbon groups transferase activity methyltransferase activity catalytic activity protein-containing complex binding binding cation binding ion binding S-adenosyl-L-methionine binding sulfur compound binding small molecule binding	methylation metabolic process cellular process cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication methylation metabolic process cellular process cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction regulation of TORC1 signaling positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication TORC1 signaling positive regulation of signaling cellular response to methionine cellular response to acid chemical cellular response to nitrogen compound cellular response to amino acid stimulus response to nutrient levels response to nutrient response to oxygen-containing compound response to nitrogen compound response to amino acid cellular response to oxygen-containing compound cellular response to nutrient levels response to acid chemical cellular response to chemical stimulus response to methionine response to chemical cellular response to nutrient cellular response to amino acid starvation cellular response to starvation cellular response to stress response to stress response to amino acid starvation response to starvation negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of biological process negative regulation of cell communication negative regulation of TORC1 signaling negative regulation of TOR signaling negative regulation of cellular process negative regulation of response to stimulus negative regulation of signal transduction	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol
D [auth C]	GATOR complex protein NPRL3	GTPase regulator activity enzyme regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity molecular function regulator activity	developmental process heart development multicellular organismal process cardiac muscle tissue development animal organ development tissue development striated muscle tissue development circulatory system development multicellular organism development anatomical structure development muscle tissue development system development ventricular septum development cardiac septum development developmental process heart development multicellular organismal process cardiac muscle tissue development animal organ development tissue development striated muscle tissue development circulatory system development multicellular organism development anatomical structure development muscle tissue development system development ventricular septum development cardiac septum development cardiac chamber development cardiac ventricle development cellular response to stimulus response to nutrient levels response to stimulus cellular response to amino acid starvation cellular response to starvation cellular response to nutrient levels cellular response to stress response to stress response to amino acid starvation cellular process response to starvation aorta morphogenesis blood vessel morphogenesis tube development artery development aorta development vasculature development anatomical structure morphogenesis tube morphogenesis artery morphogenesis blood vessel development positive regulation of autophagy regulation of biological process catabolic process regulation of cellular process autophagy biological regulation positive regulation of biological process regulation of catabolic process regulation of autophagy positive regulation of catabolic process positive regulation of metabolic process metabolic process process utilizing autophagic mechanism regulation of metabolic process positive regulation of cellular process roof of mouth development signaling negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of biological process regulation of signal transduction intracellular signal transduction negative regulation of cell communication cell communication negative regulation of TORC1 signaling regulation of intracellular signal transduction negative regulation of TOR signaling negative regulation of cellular process signal transduction regulation of TORC1 signaling TOR signaling regulation of signaling regulation of TOR signaling negative regulation of response to stimulus negative regulation of signal transduction regulation of response to stimulus regulation of cell communication TORC1 signaling	protein-containing complex GATOR1 complex Seh1-associated complex vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure protein-containing complex GATOR1 complex Seh1-associated complex vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle lysosomal membrane cytoplasm organelle membrane lysosome
E	KICSTOR complex protein SZT2	-	developmental process multicellular organism development multicellular organismal process central nervous system development anatomical structure development nervous system development system development regulation of molecular function regulation of superoxide dismutase activity regulation of catalytic activity biological regulation regulation of oxidoreductase activity protein localization to lysosome localization developmental process multicellular organism development multicellular organismal process central nervous system development anatomical structure development nervous system development system development regulation of molecular function regulation of superoxide dismutase activity regulation of catalytic activity biological regulation regulation of oxidoreductase activity protein localization to lysosome localization protein localization to organelle macromolecule localization protein localization to vacuole intracellular protein localization corpus callosum development axonogenesis cellular developmental process cell projection organization corpus callosum morphogenesis plasma membrane bounded cell projection morphogenesis forebrain development cell development central nervous system neuron development neuron projection development cell morphogenesis cellular component organization neurogenesis central nervous system neuron differentiation cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation cellular component organization or biogenesis central nervous system projection neuron axonogenesis central nervous system neuron axonogenesis head development plasma membrane bounded cell projection organization animal organ development brain development axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron development cellular process telencephalon development cellular response to stimulus cellular response to nutrient levels response to nutrient levels response to stimulus cellular response to stress response to stress response to starvation cellular response to glucose starvation cellular response to starvation regulation of cellular process signaling negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of biological process regulation of signal transduction intracellular signal transduction negative regulation of cell communication cell communication negative regulation of TORC1 signaling regulation of intracellular signal transduction negative regulation of TOR signaling negative regulation of cellular process signal transduction regulation of TORC1 signaling TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling negative regulation of response to stimulus negative regulation of signal transduction regulation of response to stimulus regulation of cell communication TORC1 signaling pigmentation cellular response to amino acid starvation response to amino acid starvation post-embryonic development	vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle lysosomal membrane cytoplasm vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle lysosomal membrane cytoplasm organelle membrane lysosome protein-containing complex KICSTOR complex peroxisome microbody

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth D]	IPR009348	Nitrogen permease regulator 2-like	Family
B	IPR048255	Vacuolar membrane-associated protein Iml1, N-terminal domain	Domain
B	IPR000591	DEP domain	Domain
B	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
B	IPR045838	DEPDC5, C-terminal	Domain
B	IPR055213	IML1, N-terminal double psi beta-barrel domain	Domain
B	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
B	IPR027244	Vacuolar membrane-associated protein Iml1	Family
C [auth A]	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
C [auth A]	IPR021867	S-adenosylmethionine-dependent methyltransferase Bmt2-like	Family
D [auth C]	IPR005365	Nitrogen permease regulator 3	Family
D [auth C]	IPR056603	GATOR1 complex protein NPRL3, C-terminal HTH domain	Domain
E	IPR033228	Protein SZT2	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth D]	Pharos: Q8WTW4	epilepsy, familial focal, with variable foci 2 schizophrenia epilepsy Epileptic encephalopathy epilepsy, familial focal, with variable foci 1 familial focal epilepsy with variable foci
B	Pharos: O75140	epilepsy, familial focal, with variable foci 1 epilepsy Autosomal dominant epilepsy with auditory features Epileptic encephalopathy hepatitis C virus infection autosomal dominant nocturnal frontal lobe epilepsy episodic kinesigenic dyskinesia 1 hepatocellular carcinoma cleft lip epilepsy, familial temporal lobe, 1 familial focal epilepsy with variable foci intellectual disability
C [auth A]	Pharos: Q1RMZ1	breast cancer ovarian cancer medulloblastoma rheumatoid arthritis osteosarcoma sarcoidosis
D [auth C]	Pharos: Q12980	sickle cell anemia epilepsy, familial focal, with variable foci 3 epilepsy Epileptic encephalopathy lung cancer epilepsy, familial focal, with variable foci 1 familial focal epilepsy with variable foci osteosarcoma tuberculosis glioblastoma psoriasis
E	Pharos: Q5T011	developmental and epileptic encephalopathy, 18 acute pancreatitis glioblastoma malignant ependymoma astrocytic tumor epilepsy hypertensive disorder malignant glioma attention deficit hyperactivity disorder, inattentive type Epileptic encephalopathy intellectual disability osteosarcoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.